Streptococcus agalactiae 2603 (serotype V): SAG0850
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Entry
SAG0850 CDS
T00091
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sag
Streptococcus agalactiae 2603 (serotype V)
Pathway
sag03030
DNA replication
sag03410
Base excision repair
sag03420
Nucleotide excision repair
sag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAG0850 (ligA)
03410 Base excision repair
SAG0850 (ligA)
03420 Nucleotide excision repair
SAG0850 (ligA)
03430 Mismatch repair
SAG0850 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sag03032
]
SAG0850 (ligA)
03400 DNA repair and recombination proteins [BR:
sag03400
]
SAG0850 (ligA)
Enzymes [BR:
sag01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
SAG0850 (ligA)
DNA replication proteins [BR:
sag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SAG0850 (ligA)
DNA repair and recombination proteins [BR:
sag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
SAG0850 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAG0850 (ligA)
MMR (mismatch excision repair)
DNA ligase
SAG0850 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SAG0850 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
UPF0758_N
RTT107_BRCT_5
BRCT_2
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
AAM99737
UniProt:
Q8E084
LinkDB
All DBs
Position
847944..849902
Genome browser
AA seq
652 aa
AA seq
DB search
MENRMNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEKQHPENILPNSPTHRVG
GLVLEGFEKYQHEYPLYSLQDAFSKEELIAFDKRVKAEFPTAAYMAELKIDGLSVSLTYV
NGVLQVGATRGDGNIGENITENLKRVHDIPLHLDQSLDITVRGECYLPKESFEAINIEKR
ANGEQEFANPRNAAAGTLRQLNTGIVAKRKLATFLYQEASPTQKETQDDVLKELESYGFS
VNHHRLISSSMEKIWDFIQTIEKDRVSLPYDIDGIVIKVNSIAMQEELGFTVKAPRWAIA
YKFPAEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIG
DTVVVYKAGDIIPAVLNVVMSKRNQQEVMLIPKLCPSCGSELVHFEGEVALRCINPLCPN
QIKERLAHFASRDAMNITGFGPSLVEKLFDAHLIADVADIYRLSIENLLTLDGIKEKSAT
KIYHAIQSSKENSAEKLLFGLGIRHVGSKASRLLLEEFGNLRQLSQASQESIASIDGLGG
VIAKSLHTFFEKEEVDKLLEELTSYNVNFNYLGKRVSTDAQLSGLTVVLTGKLEKMTRNE
AKEKLQNLGAKVTGSVSKKTDLIVAGSDAGSKLTKAQDLGITIQDEDWLLNL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcgtatgaatgaattagtatctttgttgaatcagtacgcaaaagagtattat
acacaagataatcccacagtttctgacagtcaatatgaccagttatatcgagagttagta
gaattagaaaagcaacatccagaaaacattttgccaaatagtcccacacatcgagtgggt
ggtttagttttagaaggctttgaaaaataccaacatgaatatcctttgtattcattgcag
gatgctttctcaaaagaagaattgatagcctttgataaacgtgttaaagcagagtttcca
actgctgcttatatggcagagctgaaaattgatggtctatctgtctcgttgacttatgta
aatggtgttttacaggttggggcaacacgtggtgatggcaatattggagaaaatattact
gaaaatttaaagcgtgttcatgatattcctctacatttagaccaaagtttagatattact
gttcgcggagagtgctaccttcccaaagaatcttttgaagctattaacatagaaaaacga
gcaaatggtgagcaggaatttgctaatcctaggaatgcagcagcaggaaccttgcgccaa
ttaaacacaggaattgttgcgaaacgtaaattagcaacttttctttatcaagaagctagc
cctacgcaaaaagaaacacaagatgatgttttaaaagagctagaaagctatggcttttca
gtcaatcatcatcgtttaattagctcgtctatggagaaaatttgggattttatccaaact
atagaaaaagatagagtttccctcccttatgatatcgatggtattgttattaaggttaat
agcatagcaatgcaagaagagctgggcttcactgtaaaggcacctcgttgggcgattgca
tataaatttcctgctgaagaaaaggaagcagaaatattatctgttgattggacagttggg
cgaacaggagtcgtaacaccaacagctaacctaactccagttcaactagcagggacaacc
gttagtagggccactctgcataatgtagattatattgccgaaaaagatatccgtattgga
gatactgttgttgtatacaaagcaggggatatcatccctgcagtcttaaatgtcgttatg
agtaagcgaaaccagcaagaagtcatgcttattcctaaactatgtccttcttgtggtagt
gaattagttcattttgaaggtgaggtggctttacgttgtattaatccgctgtgccccaac
caaatcaaagaacgtttagctcattttgctagccgagatgctatgaatattacaggtttt
ggtccatccttagtcgaaaaattatttgatgctcatttaatagcagatgttgcagatatt
tatcgtttaagtatagagaatttattaactttagatggtattaaagagaaatctgcaact
aagatttatcatgcaatccaatcttcaaaagaaaattctgctgaaaaacttctttttggc
ctaggtattcgtcatgtgggaagcaaggcgagccgccttttattggaggaatttggtaat
ttgaggcaactaagtcaagcaagtcaagaaagtattgcctcaattgatggactaggaggg
gttattgccaaatcacttcataccttctttgaaaaagaagaggtagataaactactagag
gaattaacttcctataacgttaattttaattatctaggaaaacgagttagtacagatgca
caactttcaggtttaacagtcgttttaaccggtaagcttgaaaaaatgactcgtaatgaa
gcaaaagagaaattacaaaaccttggtgctaaggtgacaggtagcgtttctaaaaagact
gatttaattgttgcaggaagcgatgcaggaagtaaactaaccaaggctcaagatttaggg
attacaatacaagatgaagactggttactcaacctttaa
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