Simiduia agarivorans: M5M_02155
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Entry
M5M_02155 CDS
T02281
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
saga
Simiduia agarivorans
Pathway
saga00270
Cysteine and methionine metabolism
saga00450
Selenocompound metabolism
saga00670
One carbon pool by folate
saga01100
Metabolic pathways
saga01110
Biosynthesis of secondary metabolites
saga01230
Biosynthesis of amino acids
saga04980
Cobalamin transport and metabolism
saga04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
M5M_02155 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
M5M_02155 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
M5M_02155 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
M5M_02155 (metH)
04980 Cobalamin transport and metabolism
M5M_02155 (metH)
Enzymes [BR:
saga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
M5M_02155 (metH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AFU97650
UniProt:
K4KHL4
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All DBs
Position
complement(485349..489041)
Genome browser
AA seq
1230 aa
AA seq
DB search
MADRSTLLYQALKQRILILDGGMGTLIQSHKLGESDYRGTRFADFAYDLAGNNDLLSITR
PDVIGGIHAAYLEAGADIIETNTFNATQVSQADYHLESVVWEINQASAALARKVADEYSA
KTPDKPRFVAGVLGPTSRTCSISPDVNDPGARNITFDVLVDNYLEAIDGLVKGGADILLI
ETIFDTLNAKAAVFAVHTYFEREGIELPIMISGTITDASGRTLSGQTTEAFYNSLAHAKP
ISIGLNCALGAKELRAYVKELSRVAACNVSAHPNAGLPNEFGEYDETPEEMVAVVEEFAA
SGFLNIIGGCCGTTPAHIRAIADAMAKYPPRPLPALEPACRLAGLEPFNIQRDSLFVNVG
ERCNVTGSAKFKRLILEEKYNEALEVALEQVENGAQIIDINMDEAMLDAEAAIVRFLNLI
ASEPDIARVPIMVDSSKWDVIEAGLKCVQGKPLVNSISLKEGEADFIEKARLCRLYGAAI
IVMAFDEDGQADTAARKIEICQRSYDVLVNKVGFPPEDIIFDPNIFAVATGIEEHNNYAV
DFIEATRWIRANLPHAGVSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQAGMNMGIVNAG
QLAVYDDLPAELKQKVEDVILNRHEGSTDALLAIADNYRGDGSSGPKKEDLAWREWPVEK
RLEHSLVKGITSFIEEDTEAARQNANKPIEVIEGPLMDGMNVVGDLFGAGKMFLPQVVKS
ARVMKQAVAYLQPFIEAEKSEGAKPNGKILMATVKGDVHDIGKNIVGVVLQCNNFEVIDL
GVMVPCEKILQVAQDEQCDIIGLSGLITPSLDEMVTVAREMERQQISLPLLIGGATTSKA
HTAVKIEPQFKCDQVIYVADASRAVGVATKLMSPTLKPELVNQTRAEYDTVRERTAGRKA
RGTTLAYPDAVKAGFKTDWDNYTPPVPAFTGTRIFDDYPLAQLVDTIDWTPFFISWDLAG
KYPRILEDDVVGEAARNLFADAQAMLKKIIDEKLLKARAVIGFWPANRAGADDIALFEDE
SRTRPIATQHHIRQQNKKPGDLHPNLSLADYVAPAGYRDYVGGFVVTAGIGAEELAKQYE
AAHDDYSAIMVKALADRLAESFAEHMHQRVRKEFWGYAKDETLDNEALIKEAYQGIRPAP
GYPACPDHTEKATLFQVLDATHATGVTLTEHFAMFPAAAVSGWYFSHPDSRYFNTSKISK
DQVESLATRKNLTLAEMERWLSPVLDYDPS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgcagcaccctcctctaccaagccctcaaacaacgcatcctgattctggat
ggcggcatggggacgctgattcaatcccataaattgggcgagtcagattaccgggggacc
cggtttgccgattttgcctatgacttggcaggcaacaacgacctgctatccattacccgc
ccggacgttatcggcggtattcatgcggcctacctggaagcgggcgccgatatcattgaa
accaacacctttaacgccacccaggtgtctcaggcggactatcacctcgaatctgtggtg
tgggagatcaaccaggcgtccgccgcactggcccgcaaagtcgccgatgaatactccgcc
aaaacaccggataaaccccggttcgtggccggtgtactgggtccgacctcccgcacctgc
tcgatttcgcccgatgtcaacgacccgggtgcgcgcaatattacctttgatgtattggta
gacaactacctggaagccattgacggtctggttaagggcggcgcggatattcttctgatc
gaaaccattttcgatacactcaacgccaaagccgcggtgtttgccgttcatacctatttc
gaacgcgaaggtatcgaactgcccatcatgatctccggcaccattaccgatgcctcgggc
cgcaccctgtccggccagaccacagaagccttttacaattcactggcgcacgccaaacct
atttccatcggtctgaattgtgcactgggcgccaaagaactgcgcgcctatgtcaaggaa
ctgtcgcgggtggcggcctgcaatgtgtcggctcaccccaatgccggtcttcccaatgaa
ttcggcgaatacgatgaaacaccagaggaaatggtggcggtggtggaagagtttgccgcc
agcgggttcctgaacattatcggtggctgctgcggcaccacacccgctcacatccgcgcc
atagccgacgccatggccaaatacccgccacgcccgctaccggcgcttgaacccgcctgc
cggctggccggtttggagcccttcaacatccaacgcgactccctgtttgtgaatgtgggt
gaacgctgcaacgtcaccgggtcggctaaattcaagcgcctgattctcgaagaaaaatac
aacgaagcacttgaagttgcgcttgagcaggtggaaaacggtgcgcagattatcgacatc
aacatggacgaagccatgcttgatgcagaagcagccatcgtccgtttcctgaacctgatt
gccagcgaaccggatatcgcccgcgtgcctatcatggtggactcgtccaagtgggacgtg
attgaggccgggctcaagtgcgtgcaaggtaaacctctggtgaactccatttcgctcaaa
gaaggcgaagctgatttcattgaaaaggcccgactgtgccgcctctatggtgctgccatc
attgtaatggcctttgacgaagacggtcaggccgacactgccgcccgcaagattgaaata
tgccagcgctcctatgacgtgctggtgaataaagtcggttttccacccgaggacattatt
tttgacccgaatatatttgcggtcgccacgggtattgaagaacacaacaattacgcggtt
gactttattgaggccacccgctggatccgggccaatttaccgcatgcgggcgtctccggt
ggtgtatccaacgtgtccttttcattcaggggcaacaaccccgtgcgcgaagccattcac
tcggtattcctctaccacgccattcaggccgggatgaatatgggcatcgtcaatgcgggc
cagttggccgtgtacgacgacctgccagcagagcttaaacaaaaggttgaggatgtcatc
ctgaaccggcatgaaggcagcactgatgccctgttggccattgccgacaactaccgcggc
gacggcagcagtggccccaaaaaagaagatctggcctggcgcgaatggccggtggaaaaa
cgccttgaacactcgctggtcaagggtattaccagctttattgaagaagacacggaagcc
gcccgccaaaacgccaacaaacccatcgaggtcattgaaggccctctgatggatggcatg
aacgtcgtaggcgacctgtttggtgccggtaaaatgttcctgccacaggtggtcaaatct
gcccgggtcatgaaacaggctgtagcctacctgcagccttttatcgaggctgaaaagagt
gaaggcgccaagcccaacggcaaaatcctgatggcgacggtgaaaggcgatgtgcacgat
atcggcaagaatatcgtgggcgtggtcttgcaatgcaataactttgaggtcatcgacctg
ggggtcatggtcccctgtgaaaaaatcctgcaggtggctcaggatgaacaatgcgacatc
atcggcctgtccggcctgatcactccatcgctggatgaaatggtcaccgtcgcgcgcgag
atggagcgtcagcaaatcagcctgccattgctcattgggggtgccactacctccaaggcc
cacaccgcggttaagattgaaccccaattcaagtgtgaccaggtcatctatgtggccgat
gcctcgcgtgcagtgggggtggccaccaagttgatgtctcccacccttaaaccggaactg
gtaaaccagacccgtgccgaatacgacacggtgcgtgaacgcaccgccgggcgaaaagcc
cggggcaccaccctcgcctatcccgatgctgtaaaagccggcttcaaaaccgactgggac
aattacacgccgccggtgcctgcatttaccggcacccgtatattcgatgattacccgctg
gcacaactggtggacaccatcgactggacaccctttttcatcagctgggatctggctggc
aaatacccccgcatattggaagatgacgtcgtgggcgaagcggcccgtaacttgttcgct
gacgcacaagccatgctgaagaagatcattgacgaaaaactgctgaaagcccgggctgtg
atcggattctggccggccaatcgggccggcgccgatgatatcgcgctgtttgaggacgaa
agccgcacccgtccgatcgccacccagcaccacatccggcagcaaaataaaaaacccggc
gatctccaccccaacctgtccctggccgattatgtggcacccgctggctaccgggattac
gtcggcggtttcgtggtaaccgccggcattggcgcggaagaattggccaaacaatatgag
gcagcccacgacgactatagcgcgattatggtcaaggcactggcagaccgcttggccgaa
tcttttgccgaacacatgcaccagcgggtgcggaaggagttctggggttacgctaaagat
gaaacgctggacaacgaagccctgatcaaggaagcctatcagggaattcgccctgctccg
ggttatccagcctgcccggatcacacggaaaaggccacgttattccaggtactggatgcc
acccatgccaccggtgtgaccctgaccgagcatttcgccatgttcccggcggctgcagtt
tccggctggtatttttcgcacccggactcccgctatttcaacaccagtaaaatcagcaaa
gatcaggtggaaagcctggccacacgcaaaaatctgactcttgccgaaatggaacgctgg
ttgtcgccggtactggattacgatccaagctaa
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