Simiduia agarivorans: M5M_10895
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Entry
M5M_10895 CDS
T02281
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
saga
Simiduia agarivorans
Pathway
saga01501
beta-Lactam resistance
saga01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M5M_10895
01503 Cationic antimicrobial peptide (CAMP) resistance
M5M_10895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saga03036
]
M5M_10895
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saga02000
]
M5M_10895
01504 Antimicrobial resistance genes [BR:
saga01504
]
M5M_10895
Chromosome and associated proteins [BR:
saga03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
M5M_10895
Transporters [BR:
saga02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
M5M_10895
Antimicrobial resistance genes [BR:
saga01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M5M_10895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
BSH_CzcB
Beta-barrel_RND_2
BSH_CusB
YknX_C
HH_YBHG
HH_EMRA
CzcB_C
Biotin_lipoyl
BSH_YknX
AIRS_C
BphC_D1
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
AFU99358
UniProt:
K4KMN9
LinkDB
All DBs
Position
2434010..2435239
Genome browser
AA seq
409 aa
AA seq
DB search
MYKRIWPAVLCTLLACKETPPPAPVEVVTSPAQSTYFPIYGDYVATTRASLDVEVRARVN
GFIEEVAFTEGSRVKAGDLLYRIDDRPYKARVNRLSAGVENAQALLRKTQRDVERLEPLF
RQDAASQMDLDNALAARDQARAGLAAAQAELKEASLELEYTRVTAPIDGLVGATQADLGA
LVGSSAQSLLTTVKRVDPMYVQFHMSALDYLNARRRKSSFDDQQKLDTEGKAVEGFVQIT
LPDDTRYRYWGDVDFTDPQVNPRTGTFAVRAVIPNPDRELLPGQYVHARLELDVIADAVV
IHEKAIQVEQGGTFVMVAMPDNTVERRFIVTGPRSEARVVVSSGLSAGEQIIVEGIHKVR
HGQTIRTVSAEAYAKRLEQQQADLLAPEDSAPQDTPVPDQPSGEAGEQP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaaaggatttggcccgccgtgctgtgcacgttgcttgcctgcaaagaaacccct
ccaccggccccggtggaggtggtgacctcccccgcacaatccacttatttcccgatctac
ggtgattatgtcgccaccacccgcgcctcactcgacgtagaagtgcgcgcgcgggtgaac
ggctttatcgaagaagtagccttcactgagggcagccgggtcaaagccggcgacctgttg
taccggattgatgaccgcccctacaaagcccgagttaaccgcctttcagcaggtgtggaa
aatgcgcaggcgttgctgcgaaaaactcaacgcgatgtggagcgactcgaaccgttgttc
agacaggatgccgccagtcagatggatctggataatgcactggccgcaagggatcaggcc
cgcgccggcctggccgccgcgcaagccgaattgaaagaagcgtcattggagctcgaatac
acccgggtgaccgcgcccatcgatggtcttgtgggtgccacccaggccgacctgggtgcg
ctggtgggcagcagcgcacaatccctgctcaccaccgtcaaacgggtcgaccccatgtac
gtccagttccacatgtcggcactcgactacctgaacgcccgtcgccgtaaatccagcttt
gacgaccagcagaaactggacaccgagggcaaagcggtggagggctttgttcagatcacg
ctgcccgacgacactcgctaccgctattggggcgacgtagacttcaccgacccgcaggtg
aacccccgcaccgggacctttgccgtgcgcgcagtgattcccaaccccgatcgcgaattg
ctgcccggccaatacgtgcatgcccggctggaactggatgtgattgccgatgcggtggtg
attcatgaaaaagccatccaggtcgagcagggcgggacctttgtcatggtggccatgcca
gacaataccgttgaacgccgctttattgtcaccggcccccgctcggaagcgcgagtagtg
gtgtcttctggactgtcggcaggcgagcagatcattgtggagggcattcataaagtgcgt
cacggccaaaccattcgcacggtctcggccgaggcctacgccaagcgtctggaacagcaa
caagcggacctgctcgcgcccgaggacagcgcccctcaggacacgccagtgcccgatcaa
cccagcggggaggccggcgagcaaccatga
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