Simiduia agarivorans: M5M_18750
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Entry
M5M_18750 CDS
T02281
Name
(GenBank) efflux transporter RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
saga
Simiduia agarivorans
Pathway
saga01501
beta-Lactam resistance
saga01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
saga00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M5M_18750
01503 Cationic antimicrobial peptide (CAMP) resistance
M5M_18750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
saga03036
]
M5M_18750
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saga02000
]
M5M_18750
01504 Antimicrobial resistance genes [BR:
saga01504
]
M5M_18750
Chromosome and associated proteins [BR:
saga03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
M5M_18750
Transporters [BR:
saga02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
M5M_18750
Antimicrobial resistance genes [BR:
saga01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M5M_18750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
YknX_C
Beta-barrel_RND
BSH_CzcB
BSH_CusB
RND-MFP_C
BSH_LcnD
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
AFV00879
UniProt:
K4KRU6
LinkDB
All DBs
Position
complement(4127739..4128782)
Genome browser
AA seq
347 aa
AA seq
DB search
MRTLLLALACLYTVTATAATGVYVQKLTYADFADRLEALGTLRANESVEITATVTERLLA
VHFRDGQRVKRGALLAEMDAAEEQALRQEQFLVADEAARQYERVKKLAADGLAPQSQLDE
KRREYLAAQARLDGIDARLRQLKLTAPFDGVLGIRTVSPGTLVKPGDVITTLDDDQVMKL
DFSVPSTYLPALTVGLKIKAVARALDNAAFDGEIASIDSRVDPVTRAIRVRALVPNPNAR
LRPGLLMSIDLYKSPRQALMLREEALILEGRNHYVFRVNADNKIEKVNVVPGSRAPGWVE
ILQGLNENDLLVTQGTVKLRPGAEVDVLGEIEPGQRLPDLMKGAHSS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccctactcctcgccctcgcctgcctttacaccgttactgcgaccgccgccacg
ggcgtgtacgtacagaaactcacctatgccgactttgccgatcgcctggaagcgctgggc
acgttgcgcgccaatgaatcagtggaaattaccgccacggtcaccgagcgcctgctggcg
gtgcacttccgcgacgggcaacgggtcaagcgcggtgcgctgctggccgaaatggacgcg
gcagaagaacaagcccttcgccaggaacagtttctggtagcggatgaagccgcccggcaa
tacgagcgagtgaaaaaactcgctgccgacgggcttgccccccaatctcaactggatgaa
aaacggcgcgaatacctggccgcgcaagcgcgtctggatggtatcgatgcccggcttcgc
cagctcaaactcaccgcccctttcgatggtgtgctgggcattcgcacggtcagccccggc
actttagtgaaacccggtgatgtgatcaccacactcgatgacgatcaggtgatgaaactg
gacttttccgtgccgtctacttacctgccggcactgaccgtgggcctgaaaatcaaagcc
gttgcccgcgcgctggacaacgccgcatttgatggcgaaattgccagcatcgactcccgc
gtagacccggtcacccgcgcaatccgcgtgcgcgccctggtgccaaaccccaatgcgcgt
ctgcgcccgggcttgctgatgagcatcgacctttacaaaagtccgcgccaggcgctgatg
ttgcgcgaggaagccctgattctggaaggccgcaatcactacgtgttccgcgtcaacgca
gacaacaaaattgaaaaggtcaacgtggtacccggcagtcgcgctcccggctgggttgaa
attttgcagggcctgaacgaaaacgacttattggtgacccagggcacggttaaattgcgg
ccgggcgccgaggtcgacgtcctgggtgaaattgaacccgggcaacggcttcccgacctg
atgaaaggagcgcacagctcatga
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