Streptococcus agalactiae 09mas018883: BSA_9380
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Entry
BSA_9380 CDS
T02703
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sagm
Streptococcus agalactiae 09mas018883
Pathway
sagm03030
DNA replication
sagm03410
Base excision repair
sagm03420
Nucleotide excision repair
sagm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sagm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSA_9380
03410 Base excision repair
BSA_9380
03420 Nucleotide excision repair
BSA_9380
03430 Mismatch repair
BSA_9380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sagm03032
]
BSA_9380
03400 DNA repair and recombination proteins [BR:
sagm03400
]
BSA_9380
Enzymes [BR:
sagm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BSA_9380
DNA replication proteins [BR:
sagm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSA_9380
DNA repair and recombination proteins [BR:
sagm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BSA_9380
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSA_9380
MMR (mismatch excision repair)
DNA ligase
BSA_9380
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BSA_9380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
UPF0758_N
RTT107_BRCT_5
BRCT_2
zf-tcix
Motif
Other DBs
NCBI-ProteinID:
CCW37710
LinkDB
All DBs
Position
880027..881973
Genome browser
AA seq
648 aa
AA seq
DB search
MNELVSLLNQYAKEYYTQDNPTVSDSQYDQLYRELVELEKQHPENILPNSPTHRVGGLVL
EGFEKYQHEYPLYSLQDAFSKEELIAFDKRVKAEFPTAAYMAELKIDGLSVSLTYVNGVL
QVGATRGDGNIGENITENLKRVHDIPLHLDQSLDITVRGECYLPKESFEAINIEKRANGE
QEFANPRNAAAGTLRQLNTGIVAKRKLATFLYQEASPTQKETQDDVLKELESYGFSVNHH
RLISSSMEKIWDFIQTIEKDRVSLPYDIDGIVIKVNSLAMQEELGFTVKAPRWAIAYKFP
AEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIGDTVV
VYKAGDIIPAVLNVVMSKRNQQEVMLIPKLCPSCGSELVHFEGEVALRCINPLCPNQIKE
RLAHFASRDAMNITGFGPSLVEKLFDAHLIADVADIYRLSIENLLTLDGIKEKSATKIYH
AIQSSKENSAEKLLFGLGIRHVGSKASRLLLEEFGNLRQLSQASQESIASIDGLGGVIAK
SLHTFFEKEEVDKLLEELTSYNVNFNYLGKRVSTDAQLSGLTVVLTGKLEKMTRNEAKEK
LQNLGAKVTGSVSKKTDLIVAGSDAGSKLTKAQDLGITIQDEDWLLNL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattagtatctttgttgaatcagtacgcaaaagagtattatacacaagataat
cccacagtttctgacagtcaatatgaccagttatatcgagagttagtagaattagaaaag
caacatccagaaaacattttgccaaatagtcccacacatcgagtgggtggtttagtttta
gaaggctttgaaaaataccaacatgaatatcctttgtattcattgcaggatgctttctca
aaagaagaattgatagcctttgataaacgtgttaaagcagagtttccaactgctgcttat
atggcagagctgaaaattgatggtctatctgtctcgttgacttatgtaaatggtgtttta
caggttggggcaacacgtggtgatggcaatattggagaaaatattactgaaaatttaaag
cgtgttcatgatattcctctacatttagaccaaagtttagatattactgttcgcggagag
tgctaccttcccaaagaatcttttgaagctattaacatagaaaaacgagcaaatggtgag
caggaatttgctaatcctaggaatgcagcagcaggaaccttgcgccaattaaacacagga
attgttgcgaaacgtaaattagcaacttttctttatcaagaagctagccctacgcaaaaa
gaaacacaagatgatgttttaaaagagctagaaagctatggcttttcagtcaatcatcat
cgtttaattagctcgtctatggagaaaatttgggattttatccaaactatagaaaaagat
agagtttccctcccttatgatatcgatggtattgttattaaggttaatagcttagcaatg
caagaagagctgggcttcactgtaaaggcacctcgttgggcgattgcatataaatttcct
gctgaagaaaaggaagcagaaatattatctgttgattggacagttgggcgaacaggagtc
gtaacaccaacagctaacctaactccagttcaactagcagggacaaccgttagtagggcc
actctgcataatgtagattatattgccgaaaaagatatccgtattggagatactgttgtt
gtatacaaagcaggggatatcatccctgcagtcttaaatgtcgttatgagtaagcgaaac
cagcaagaagtcatgcttattcctaaactatgtccttcttgtggtagtgaattagttcat
tttgaaggtgaggtggctttacgttgtattaatccgctgtgccccaaccaaatcaaagaa
cgtttagctcattttgctagccgagatgctatgaatattacaggttttggtccatcctta
gtcgaaaaattatttgatgctcatttaatagcagatgttgcagatatttatcgtttaagt
atagagaatttattaactttagatggtattaaagagaaatctgcaactaagatttatcat
gcaatccaatcttcaaaagaaaattctgctgaaaaacttctttttggcctaggtattcgt
catgtgggaagcaaggcgagccgccttttattggaggaatttggtaatttgaggcaacta
agtcaagcaagtcaagaaagtattgcctcaattgatggactaggaggggttattgccaaa
tcacttcataccttctttgaaaaagaagaggtagataaactactagaggaattaacttcc
tataacgttaattttaattatctaggaaaacgagttagtacagatgcacaactttcaggt
ttaacagtcgttttaaccggtaagcttgaaaaaatgactcgtaatgaagcaaaagagaaa
ttacaaaaccttggtgctaaggtgacaggtagcgtttctaaaaagactgatttaattgtt
gcaggaagcgatgcaggaagtaaactaaccaaggctcaagatttagggattacaatacaa
gatgaagactggttactcaacctttaa
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