Staphylococcus agnetis: EP23_03005
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Entry
EP23_03005 CDS
T04155
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sagq
Staphylococcus agnetis
Pathway
sagq00020
Citrate cycle (TCA cycle)
sagq00785
Lipoic acid metabolism
sagq01100
Metabolic pathways
sagq01110
Biosynthesis of secondary metabolites
sagq01120
Microbial metabolism in diverse environments
sagq01200
Carbon metabolism
sagq01210
2-Oxocarboxylic acid metabolism
Module
sagq_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sagq_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sagq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EP23_03005
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EP23_03005
Enzymes [BR:
sagq01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
EP23_03005
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Rota_NSP4
Motif
Other DBs
NCBI-ProteinID:
ALN76407
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Position
complement(618509..621298)
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AA seq
929 aa
AA seq
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MKNDKQVTEAPVNFGANLGLMLELYDQFLEDPSSVTEDLQVLFSTIKDGEATVSQKSNQT
SSGDSTIKRVMKLIDNIRQYGHLQADIYPVNKPERKHLPKLTIEDFDLDKQTLEGISADI
VSEHFKDIYDNAYEAILRMEQRYKGPIAFEYTHINNNKERVWLKRRIETPYKANLNTEEK
KALFKQLAHVEGFERYLHKNFVGAKRFSIEGVDALVPMLSRTIKRASEENITNIQIGMAH
RGRLNVLTHILKKPYSMMLSEFMHTDAMKFLPEDGSLNLTSGWTSDVKYHLGGVKTIHDH
GHEQRIVLANNPSHLEVVAPVVTGRTRASQDNTNRSGQIETNFNQGMPIIIHGDAAYPGQ
GVNFETMNLGSLHGYSTGGTLHIITNNRIGFTTDPIDGRSTTYATDVAKGYDVPIMHVNA
DDVEATIEAIDIAMEFRKTFNKDVVIDLVGYRRYGHNEMDEPSLTNPLPYKNIRKHDTVD
IIYGKKLIDEGIITKDDMDKVISSVQKEMREAHDAIDKNDKNNNTDMNIPEGISKPLESN
DSALSFDRLKEINDAMLTYPEGFNVFKKLNRILEQRRQAFDSETGLVDWAHAEQLAFATV
MQEGTPIRMTGQDSERGTFSHRHAVLHDQENGDVFVPLQNVPNQKATFDIHNSPLSEAAV
VGFEYGYNVENPSSFNIWEAQFGDFSNMAQMYFDNFIFSGNAKWGERSGLTFFLPHAFEG
QGPEHSSARLERFLQLAAENNMTVCNLSSSSNYFHLLRAQAASLNTDAMRPLVIMSPKGL
LRNKTVAKPIAEFTQGGFEPILIEDYDASKVKKVILATGKMFIDLKERLQKEPNPEILLV
AIERLYPFPEEEVAQLLSSLEGINTVTWVQEEPQNQGAWHYVYPILSRILDKDIALQYEG
RKHRAAPSEGDGEIHKLVQNIIIEKSLNI
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgataaacaggtgactgaggcacctgtaaacttcggagcgaatctaggatta
atgttagaactctatgatcagtttttagaagatccaagttcagtcactgaagatttacaa
gtgctctttagcacaatcaaagatggcgaagcaactgtatcacaaaagtcaaatcaaaca
agctcaggggatagcaccattaaacgtgttatgaagttgattgataacattagacaatat
gggcatttacaagcagatatttatcctgtaaataagcctgaacgtaaacatttacctaaa
ttaacaatagaagattttgatttagataaacaaacgctcgaaggtatatctgccgatatc
gtatcagaacactttaaagatatttatgataatgcatatgaagcaatattaagaatggag
caacgctacaaaggcccaatcgcgtttgagtatacacacatcaataataataaggaacgt
gtatggttaaaacgtcgtattgaaacgccgtataaagcaaatcttaatactgaagagaaa
aaagctttatttaaacaacttgctcatgtagaaggattcgaaagatacttacacaaaaac
tttgtgggtgcaaaacgtttctctattgaaggtgtggacgcattagtaccgatgttatca
cgcacaattaaacgtgcttctgaagaaaatattactaatattcaaattggtatggcacat
cgtggtcgtttaaatgtgttgacacatattcttaaaaaaccatacagtatgatgctttct
gaatttatgcatactgatgcgatgaaatttttaccagaagatggcagcttaaatttaaca
tccggttggacgagtgatgtgaagtatcatttaggtggtgtaaaaaccattcatgaccac
gggcatgaacaacgcattgttttagcaaataatccgagtcatttagaggttgtcgcacca
gtggtaactggacgcacacgtgcttcacaagataacactaatcgttcgggccaaattgaa
acaaactttaatcaaggtatgccgataatcattcatggtgatgctgcttatccaggacaa
ggggtcaactttgaaacgatgaacctgggcagtttacatggttattctacaggtgggaca
ttgcatattattaccaataaccgtattggattcacaacagatcctatagatggtcgctct
acgacttatgcgacagacgttgcaaaaggatatgatgttcctatcatgcatgtcaatgca
gatgatgtagaagcaacaattgaagccattgatattgctatggaattccgtaaaacattt
aataaagatgttgtcatcgatttagtcggataccgtcgttacggacataatgaaatggat
gaaccttcacttactaatccgttaccatataaaaacattcgaaaacacgacacggtagat
atcatttatggtaaaaagcttattgatgagggcattattactaaagatgatatggacaaa
gtcatttcaagtgttcaaaaagaaatgcgtgaagcacacgatgccatcgataaaaatgat
aaaaataataatacggatatgaacattccagaaggcatttctaaaccattggagagtaat
gacagtgcgctttcgtttgatcgattaaaagaaattaatgatgcaatgttaacttaccct
gaaggcttcaatgtgtttaaaaaattgaatcgtattttagaacaacgacgtcaagcattt
gatagcgaaacaggactcgtagactgggcgcatgcggaacaacttgcttttgccacagta
atgcaagaaggcacaccaattcgaatgactggtcaagatagtgagcgtggtacatttagt
catcgtcacgctgtattacacgaccaagaaaatggtgatgttttcgttccacttcaaaat
gtgccgaatcaaaaagcaacattcgatattcacaattcaccattatcagaagctgctgtt
gtaggtttcgaatatggatacaatgttgaaaacccatcttcctttaatatttgggaagct
caatttggtgatttctctaatatggctcaaatgtatttcgataactttattttctcagga
aatgccaaatggggagagcgctcaggtctcactttcttcttaccacatgcgtttgaaggt
caaggaccagagcattcatcagcacgtttagagcggttcttacaactcgctgcagaaaat
aatatgaccgtatgtaacttgtcaagttcaagtaattacttccacctgttgcgtgcacaa
gcagcaagcttaaatacggatgcaatgcgaccgttagtcatcatgtcaccaaaaggatta
ttacgaaataaaacagtcgcaaaaccaattgcggaatttactcaaggtggctttgagcca
atattaattgaagattacgatgcctcaaaagttaaaaaagtcattttagctacaggtaaa
atgtttatagaccttaaagagcgtcttcaaaaagaacctaatccagaaattctattagtc
gcaattgagcgcttatatcctttccctgaagaagaagtggcacaattattatcgtcactt
gagggtatcaatacagtgacatgggttcaagaagaacctcaaaaccaaggggcttggcat
tatgtatatcctatactctcacgcattcttgataaagacatcgcgcttcaatatgaaggt
cgtaaacaccgtgcagcaccatcagaaggtgacggagaaattcacaaactggttcaaaat
atcattattgaaaaaagtttaaatatctag
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