Sagittula sp. P11: CDO87_11175
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Entry
CDO87_11175 CDS
T05219
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sagu
Sagittula sp. P11
Pathway
sagu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sagu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDO87_11175 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagu03400
]
CDO87_11175 (nth)
Enzymes [BR:
sagu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CDO87_11175 (nth)
DNA repair and recombination proteins [BR:
sagu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDO87_11175 (nth)
Prokaryotic type
CDO87_11175 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AUC53718
LinkDB
All DBs
Position
complement(2308212..2308856)
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AA seq
214 aa
AA seq
DB search
MARQMDYHTLREVFSRFRAAEAEPKGELNHVNAYTLVVAVALSAQATDAGVNKATAGLFA
VADTPEKMLALGEEGLIEHIKTIGLFRNKAKNVIKLSRILVEEYGGEVPCSRAALESLPG
VGRKTANVVLNMWWHYPAQAVDTHIFRVGNRTGICPGKDVVAVERAIEDHVPVDFQQHAH
HWLILHGRYICVARKPKCKACLINDLCPFEEKTA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcagatggattatcacaccctgcgtgaggtgttctcgcgcttccgggcggcg
gaggccgagccgaagggcgaactgaaccacgtgaacgcctacacgctggtggtcgcggtg
gcgctgtcggcgcaggcgacggacgcgggcgtgaacaaggcgacggcggggctgttcgcc
gtggcggacacgccggagaagatgctggcgctgggcgaagaggggctgatcgagcacatc
aagacgatcgggctgttccgcaacaaggcgaagaacgtcatcaagctgtcgcgcatcctc
gtggaggagtacggcggcgaggtgccctgttcgcgcgccgcgctggaatcgctgcccggt
gtggggcggaagacggcgaatgtcgtgctgaacatgtggtggcattacccggcgcaggcg
gtggacacgcatatcttccgggtcggcaaccggacggggatctgtccgggcaaggacgtg
gtcgccgtggagcgggccatcgaggatcacgtgccggtggatttccagcagcacgcgcat
cactggctgatcctgcacgggcgctacatctgcgtggcgcgtaaaccgaaatgcaaggcg
tgtctcataaacgatctctgcccgttcgaggaaaagaccgcatga
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