Salinicola sp. JS01: QO259_03300
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Entry
QO259_03300 CDS
T09138
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sajs
Salinicola sp. JS01
Pathway
sajs01501
beta-Lactam resistance
sajs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sajs00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QO259_03300
01503 Cationic antimicrobial peptide (CAMP) resistance
QO259_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sajs03036
]
QO259_03300
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sajs02000
]
QO259_03300
01504 Antimicrobial resistance genes [BR:
sajs01504
]
QO259_03300
Chromosome and associated proteins [BR:
sajs03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
QO259_03300
Transporters [BR:
sajs02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
QO259_03300
Antimicrobial resistance genes [BR:
sajs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QO259_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
RND-MFP_C
HH_AAEA_pHBA
Beta-barrel_RND
YknX_C
HH_EMRA
BSH_CzcB
HH_YBHG
BSH_CusB
CzcB_C
Beta-barrel_RND_2
She9_MDM33
DRY_EERY
Motif
Other DBs
NCBI-ProteinID:
WIX33697
LinkDB
All DBs
Position
687676..688971
Genome browser
AA seq
431 aa
AA seq
DB search
MRPTLMNRPIGIGGAILLSLVLSACGGDESSSAGDQQQGQQKPPTQAQVLEVKARDIGLS
KTYPGMIRSDQEVTVMGRVEGILEARHYQEGSLVEKGDKLFTIEPAPYKATVEQRQADVQ
SAQAELYRAQRDAERYARLYKQNSVSQQQRDQSQADLRTAQASLAQAKAALDSAQIDLSY
TQVNAPVSGMISLSEVNVGNLVQPPQQLATITPLNPIEVRFSLPADDAFALRRQRQHDAE
EADAAVLTAPSTASATREPLKLAGKLDFLGSRVDESTSTVQAEATFRNQDGLFLPGQFVR
VTLPNVKRYDVFAVPAVAVTEGLKGPQVYILNADGKAEARFVSLGEVAGDWQIITQGLDS
GDRVVVSGIGSVSPGDKIDPQPFSGSAEQPQDKAGENPSQKADAKGGEGGEGAQANEGAQ
GQTDGGQNGAN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctacactcatgaatcgccccatcggtatcggtggcgcgatactgctctcgctc
gtactgtccgcctgcggcggtgacgagtcatccagtgccggtgaccagcagcaggggcag
cagaagccgccgacacaagcccaggtgctggaagtcaaggcgcgcgatatcgggctgtcc
aagacctatccgggcatgatccgcagcgatcaggaggtcacggtgatggggcgcgtcgag
gggattctcgaggcgcgtcactaccaggaaggcagtctggtcgagaagggcgacaagctc
ttcaccatcgaacccgccccctacaaggcgaccgtggagcagcgccaggccgacgtgcag
agcgctcaggccgagctctatcgcgcgcagcgcgatgccgagcgctatgcgaggctctac
aagcagaactctgtcagccagcagcagcgcgatcagtctcaggccgatctgcgcaccgcc
caggcgtcgctggcccaagccaaggcggcgctggacagcgcccagatcgacttgagttac
acccaggtcaatgccccggtcagcggcatgatcagcctgagcgaggtcaacgtgggcaat
ctggtgcagccgcctcagcagctggcgacgatcaccccgctcaatcccatcgaggtgcgc
ttctcgctgcccgccgacgacgccttcgcgctgcgccgccagcgtcagcacgacgccgag
gaagccgacgccgcggtgctcaccgcgccgtcaaccgcctcggccacgcgtgagccgctc
aagctcgccggtaagctcgacttcctcggctcgcgggtcgacgagagcaccagcaccgtc
caggccgaagccaccttccgcaaccaggacggtctgttcctgcccggtcagttcgtgcgt
gtcacgctgcccaatgtgaagcgctatgacgtcttcgcggtacccgcggtggcggtgacc
gaggggctcaaggggccgcaggtgtacattctcaacgccgacggcaaggccgaggcgcgc
ttcgtgtcgctgggtgaggtcgccggcgactggcagatcatcacccaggggctcgacagc
ggcgaccgcgtcgtggtctcgggcatcggcagcgtctcgcccggtgacaagatcgacccg
cagccgttctccggcagcgcagagcagccccaggacaaggccggcgagaacccctcgcag
aaggccgacgccaagggtggcgagggcggcgaaggagcccaggccaatgaaggcgcccag
ggccagaccgatggcggccagaacggagccaactga
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