Salicibibacter halophilus: EPH95_00025
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Entry
EPH95_00025 CDS
T06083
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sale
Salicibibacter halophilus
Pathway
sale03030
DNA replication
sale03430
Mismatch repair
sale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EPH95_00025 (holA)
03430 Mismatch repair
EPH95_00025 (holA)
03440 Homologous recombination
EPH95_00025 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sale03032
]
EPH95_00025 (holA)
03400 DNA repair and recombination proteins [BR:
sale03400
]
EPH95_00025 (holA)
Enzymes [BR:
sale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EPH95_00025 (holA)
DNA replication proteins [BR:
sale03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EPH95_00025 (holA)
DNA repair and recombination proteins [BR:
sale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EPH95_00025 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
STM3845
Peptidase_S49_N
ENTH
HP_1247_C
DNA_pol3_gamma3
DUF7491
HPAT_C
Motif
Other DBs
NCBI-ProteinID:
QDI89757
UniProt:
A0A514LD46
LinkDB
All DBs
Position
4759..5793
Genome browser
AA seq
344 aa
AA seq
DB search
MSTYLQTRKKITTGDFSSVYFFYGTERYIMDDLIQQISRHALEDAERAFNFSQFDMREVP
VQEGIEEAETVSFFGPGRVIIFQHARFLTGAKDKDMPPHDLKRLEAFLADPPPETIVVFS
VEAEKVDERKKIVKKLKDVGETVETSPLQGDRLKQWIREKTKEENISLTAEAMDELLRRS
NSDLLTLEKEIQKCAQYVNFNGEINASIVRALVPRSLEDNIFQLIDAVSDSHPAKALQLF
DDLLRNGEEPIKIIALIGRQFRLLNLAAEMDKRGYSQQKAARQLGVPPFVAKRLSAKAKT
VNSEAVGRALSLIAETDYKMKQGAVEKKSGVALLIARLPRVLAG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatatttgcaaacgaggaaaaagattacgaccggggatttttcctctgtttat
ttcttctatggtacggaacggtatataatggacgatctcatacagcaaattagccgccat
gccctagaagatgccgagagggccttcaatttctcacaattcgatatgcgggaagttcct
gtacaggaggggatcgaggaagcagaaacggtaagttttttcggcccgggaagggtcatt
atttttcaacatgcccgttttctgaccggtgcgaaagacaaggatatgccgccgcatgat
ttgaaacgattagaggcttttttagctgatccgcccccagagactatcgttgttttttcg
gtagaggcagagaaggtggatgaacgcaaaaaaattgtaaaaaaattaaaagatgtgggc
gaaacagtggagacttctcccttgcaaggcgatcgattgaagcagtggataagagagaaa
acaaaggaagaaaatatttccttaaccgctgaagcaatggatgaactgctgaggcgttca
aattcggatttattgactttggaaaaagaaattcaaaaatgcgcccaatatgtcaatttc
aatggagaaattaacgcttcaattgtgcgtgcgctcgttcccaggagtttggaagataat
atctttcagctcatcgacgcggtaagcgacagccatcccgcgaaggcgttacaattattt
gatgatttactcagaaacggggaagaaccgataaaaattatcgctcttattggccgtcag
tttcgcttgttaaatcttgcggcagagatggataagcgtggatacagccaacaaaaagca
gcccggcaattgggagtgcccccattcgtcgccaagcggctgtccgcaaaggctaaaacc
gttaatagtgaagcagttggccgcgcgctctccttgattgccgagaccgattacaaaatg
aaacagggcgcggtggaaaaaaagagcggggttgctttattaatcgctcgtttgccgcgg
gtgttagcggggtga
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