Salicibibacter halophilus: EPH95_00235
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Entry
EPH95_00235 CDS
T06083
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sale
Salicibibacter halophilus
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sale03019
]
EPH95_00235
03009 Ribosome biogenesis [BR:
sale03009
]
EPH95_00235
Enzymes [BR:
sale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EPH95_00235
Messenger RNA biogenesis [BR:
sale03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EPH95_00235
Ribosome biogenesis [BR:
sale03009
]
Prokaryotic type
rRNA helicases
EPH95_00235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDI89795
UniProt:
A0A514LE01
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All DBs
Position
48749..50041
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AA seq
430 aa
AA seq
DB search
MNRSLIEVIKLSGFTRLGIDNRLTTHLQHEHINRPTEIQERLIPAILRGKDVIGQSQTGT
GKTLAFALPILSGIHPDDHCLQAVVTAPTRELAEQLYKVFQKCIKDSGMEEIRIRRVIGG
TDKERNMADLQRPPHVVIATPGRLHDLVIKETALDVHRVRTLVVDEADQMLEMGFLESLD
QVAVRMPEALQMLVFSASIPQRLQPFLKKYMNQPRHVHVKPEHPSPKNLAHYLIPLRSRG
RQQLAVEMAALLRPYLCLIFANTKKEAEELTDLFIEHGLQTECMHGDLSPRARKRSMRNI
ERAAVPYVICTDIAARGMDIKGVSHIINLQLPQDLEYYLHRSGRTARAGASGEVFTIVSK
EDYPALHQLQKQRFTFQYLDIKKGEWLEIDQLGSGYAPGRKRNRQPQKQKDPSQKPKKIK
PGYKKRRKRK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtagcttaattgaggtgatcaaattgtcaggtttcaccagactagggattgat
aatcgtttaacaacccatttgcaacatgaacatataaacagaccgacggaaattcaagaa
cggcttattcctgctatattaaggggaaaagatgtcatcggccagtctcaaacgggcacc
gggaagacacttgcttttgccttgccgatattgtcggggattcatccggatgaccattgt
ctgcaggctgtggtgactgccccaacgagagaattggccgaacagctctataaagttttc
caaaaatgtatcaaagacagcggcatggaagaaattcgcatccggcgagtcattggcgga
acggataaagaacggaacatggcggaccttcaacgaccgccgcacgttgtcattgcaaca
ccagggagattgcacgatcttgtgataaaagaaaccgcccttgatgtccatcgtgtacgg
acgcttgtcgttgatgaagcagaccaaatgttggaaatgggtttcttggaatcgctggat
caagtggccgtccgtatgccggaagctttgcaaatgctcgtcttttccgcgagcatcccg
caacgccttcaaccttttttaaaaaaatacatgaaccaaccgcgccatgtgcacgtaaaa
ccggaacatccttcgccaaaaaacctagcccattacctgattccgttacgtagtcgcgga
cgccaacaattggcggtggaaatggcagctttattgcggccgtatttatgcttgattttt
gcgaatacgaaaaaagaagcggaagaactaacggatctatttattgagcatggacttcaa
accgagtgcatgcatggagacctttccccccgtgcccgtaaacggtcgatgcgaaacatc
gaacgtgcggctgtgccttatgtgatttgtaccgatatcgcggcccgcgggatggacatc
aaaggggtttcccatatcatcaatctgcaattgccgcaggatttagagtattatttgcac
aggtcagggcgcacagcccgggcgggagcttcaggtgaagtgttcacgattgtttccaaa
gaagattatccggcacttcaccaattacaaaaacaacggtttacttttcagtatttggat
attaaaaaaggggaatggcttgaaattgatcaattaggcagtggttatgcaccgggaaga
aaacgtaaccgccaaccgcaaaagcaaaaggatccgtcccagaaaccgaaaaaaatcaaa
cccggttataaaaagaggaggaaaagaaaatga
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