Salicibibacter halophilus: EPH95_02535
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Entry
EPH95_02535 CDS
T06083
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sale
Salicibibacter halophilus
Pathway
sale03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EPH95_02535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sale03019
]
EPH95_02535
03009 Ribosome biogenesis [BR:
sale03009
]
EPH95_02535
Enzymes [BR:
sale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EPH95_02535
Messenger RNA biogenesis [BR:
sale03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EPH95_02535
Ribosome biogenesis [BR:
sale03009
]
Prokaryotic type
rRNA helicases
EPH95_02535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
AAA_30
CMS1
Helicase_RecD
Flavi_DEAD
PRD1_P5_spike_N
Motif
Other DBs
NCBI-ProteinID:
QDI90183
UniProt:
A0A514LEA2
LinkDB
All DBs
Position
complement(509866..511479)
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AA seq
537 aa
AA seq
DB search
MTIFESEHIKPEVKKAIKEIGFEEPSPIQEQAIPKALDGKDVIGQAQTGTGKTAAFGIPL
LTKLSASSHVQALVLTPTRELAIQVAGELQKLSTHLHVTTLPVYGGQSIGHQIKALKRGV
QVVIGTPGRVQDHLRRRTLKLDRVQTLVLDEADEMLDMGFIDDIESILKQTNEDRQTMLF
SATMPDPIRKLSRRYMQQPETVSISKGDVTAPSIEQIYFKVLEKNKLESLCRVIDRYNPE
LAIVFCRTKKGVAELSESLQARGYFADGLHGDLNQSQRDAVMKRFRESTIEYLVATDVAA
RGLDVQNVTHVINYDIPQDPESYVHRIGRTGRAGKSGQALTLVTPREMKHLRSIEKEIKM
SLPTRDIPTLEEVVEKQQDSWRQQITSVIEHSEETSIFDELTRELLEQYQPREVIDALLK
MNYQTENSISEEGYYFGDTGAAKGMVRFFMNVGRNVSLTPKILVDEIADAVGISKKSIGR
IDLFEKFTFVEVPEDVAPFVYEGLRHSRVNGARVNLEPAKPKPKRHGRQTTNPSVSN
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgactatatttgaaagcgaacatattaaaccggaagtgaaaaaagcaattaaggagata
ggctttgaagagccttctccgatccaggaacaagcaataccgaaagcactggacggcaaa
gatgtaattgggcaagcgcaaacgggaaccggaaagacggcagcattcgggattccgctg
cttacaaaactaagcgcctcctcccacgtccaagcgctcgttctaacgcctacccgggaa
ctcgccatccaagtggccggcgaattgcaaaagttgtccacgcacttgcatgtcacgacg
cttcctgtctacggcggccaatccattggccatcagattaaggcgcttaaacgcggggta
caagtcgttatcgggaccccgggacgggttcaagaccatttgcgccgaagaacgttaaag
cttgaccgcgtgcagacacttgttttggatgaagcggatgaaatgctggatatgggcttt
atcgatgatattgaatcgattctgaaacaaacgaacgaggaccggcaaacgatgcttttt
tcagcaacgatgcccgacccgatacgaaaattgtcccgccgctacatgcagcaaccggag
accgtatccatcagcaaaggcgatgttacggccccatcgattgaacagatttattttaaa
gtccttgaaaaaaacaaacttgaatcgctttgccgtgtgatcgaccgctacaatccggaa
ctcgcgatcgttttctgccgcacgaaaaaaggcgttgcggaattatcggaatccttgcag
gcgcgggggtacttcgcagacggccttcacggcgatttgaaccaatcacagcgggacgcg
gtgatgaaaaggtttcgtgaaagcacgattgaatatctcgttgcaacggatgttgctgcc
cgcggcctggatgttcaaaacgtcacccacgtgattaattatgatatcccgcaagacccg
gaatcctatgttcatcgcatcgggcgaaccggacgggccggaaagagcggccaggccctc
acgctcgtcactccgcgggaaatgaagcatttacgctcgatcgaaaaagaaatcaaaatg
tccttgccgacccgggatatcccgacgctggaagaagtcgtggaaaaacagcaggactcg
tggcgacagcaaatcactagcgtgattgaacatagcgaagagacatcgatctttgatgag
ttaacgcgggaactgctcgaacaatatcaaccgcgggaagtcattgatgcgctgttgaaa
atgaattatcaaacggaaaacagcatctccgaagaagggtattattttggtgataccggc
gcggcaaaaggcatggtccgtttctttatgaacgtgggccgcaatgtgagcctgactccg
aaaatactcgtggatgaaattgccgatgcagtcgggatttcaaaaaaatcgatcggccgc
atcgaccttttcgaaaaatttacgttcgtggaagttccggaagatgtggctccttttgtt
tatgaaggtttgcgccactcccgtgtaaacggtgcgcgcgtaaacctggagccggcaaaa
ccaaaaccgaaacgccacgggcggcaaacaaccaacccttccgtctccaattag
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