Salicibibacter halophilus: EPH95_03015
Help
Entry
EPH95_03015 CDS
T06083
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
sale
Salicibibacter halophilus
Pathway
sale03030
DNA replication
sale03430
Mismatch repair
sale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EPH95_03015
03430 Mismatch repair
EPH95_03015
03440 Homologous recombination
EPH95_03015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sale03032
]
EPH95_03015
03400 DNA repair and recombination proteins [BR:
sale03400
]
EPH95_03015
Enzymes [BR:
sale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EPH95_03015
DNA replication proteins [BR:
sale03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EPH95_03015
DNA repair and recombination proteins [BR:
sale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EPH95_03015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
L_biotic_typeA
Motif
Other DBs
NCBI-ProteinID:
QDI90269
UniProt:
A0A514LEL2
LinkDB
All DBs
Position
complement(594445..598743)
Genome browser
AA seq
1432 aa
AA seq
DB search
MDDSTVRYERFQLLLEQIGIPEDVYQSELRSGRIDKLDVYRENRKWHFTFRLDKPVNAFA
IQLLQEKLNAGFREMATIDFSVVYDEGNIPSEQVTAYWPAIIAKARDLPDHIARKLERSK
PTVNGRSVMLTCHSDVEANSLSKQAGPVLETAIQSLGFERLAFSPKVEVATEEETRFLEQ
KKEEEQSKVIEAMMEQQKKEKQAEPEAKKQLHIGYPIKDEPLPLASIQDEERRVTIQGYV
FQAETRELRSGRMLLTFKLTDYTDSLLVKMFSRDKEDIPLFKEVKAGKWLKARGGIQDDT
FVRDLVMIANDVTEVQIARRMDEAPENEKRIELHAHTTMSQMDGVASPGEIVEKAAQWGH
EAVAITDHGVVQGFPEAHSAAKKNDIKLLYGMEAYLVDDGVPIAYNESERDLAESTFVVF
DVETTGLSAVYDTIIELAAVKVANGEIVDRFESFAQPHVPLPAKITELTGITDEMLTDAP
EVSDVLQQFADFAGDAGFVAHNASFDIGFINAGYKKEGWPEVEQPVVDTLELARFLYPNM
KNHRLNTLCKAFDIELVSHHRAIYDTEATAYLFIKMIRDAKEQGIDQHGQLNENIGRGDF
YKSRPSHCTILVQNETGLKNLYQLVSLSHLSYFHRTPRIPRSKLVQYRDGLLVGSGCEKG
EVFETMMQKSAEEAEKAARFYDFIEIQPPEIHGHLLEKDIIRSEAQLLDIMRKLNDVGER
LAIPVVATGNVHYLEPEDHIYRKILVSSQGGANPLNKQTMPKVHFRTTAEMLEAFSFLGE
EKARQAVVKAPKKLADETEDIAPVPSGLYAPNIEGADEEMRRLTFGKARSIYGEDLPAIV
EERLEKELESIIGHGYGVIYLISHKLVKRSLDDGYLVGSRGSVGSSFVATMSDITEVNPL
PPHYVCPNCSHSIFYDDGSVASGYDLPDKPCEQCGTSYTREGHDIPFETFLGFKGDKVPD
IDLNFSGEYQARAHAYTRDLFGDDKVFRAGTIGTVADKTAYGFVRGYQNDHQIDHIRGAE
IDRLVHGCTGAKRTTGQHPGGIIVVPGDKDIHDFCPVQYPADDKNASWKTTHFDFHSIDD
NLLKLDILGHDDPTVIRMLQDLSGIDPNDIPVDDPEVMRIFEGPEVLGVTPEQILCKTGT
YGIPEFGTRFVRQMLEETKPKKFSELLQISGLSHGADVWLGNADELIRDGICELKDVIGL
RDNIMVNLIYKGLEPSLAFKITEFVRKGRGLEQEWIDEMKNHGVPDWYIQSCLKIKYMFP
KAHAAAYVLMAVRIAYFKVHHPILFYATYFSVRASDFELETMQKGSAAIRARIEDIQAKG
FDAAPKEKSLVTVLELALEMTERGFSFGSIDLYRSEASMFIVDGETLIPPFGALEGVGAN
AAKNIVEARTDGEFLSKEDLQQKSKATKNVIQILGASGCLEGMPDSNQLSLF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagtactgttcggtatgaacgttttcaactacttttggagcagattggtatc
cctgaagatgtttaccaatcagaactgcgatccgggcgcatcgacaaattagatgtttat
cgggaaaatcgtaaatggcattttacgttcaggctggacaaaccggtaaatgcgttcgcg
atccaactattgcaggaaaagctcaatgcaggattccgagaaatggcaacgatagatttt
tcagttgtctacgatgaaggaaatatcccctccgaacaagtgacagcgtattggcccgcg
atcatcgccaaagcgcgagacctccccgatcatatcgcccgaaaactggaacgttcgaaa
ccgacggttaacggacgttccgtgatgcttacgtgccacagtgatgtagaagccaattcc
ctttccaaacaggcaggtcctgtattggagacagcgattcaatctttagggtttgagagg
cttgccttttctccgaaagtcgaagtggctaccgaggaagaaacccgctttttagagcag
aaaaaagaagaagagcaatccaaagtcattgaagcgatgatggaacagcaaaaaaaggaa
aaacaagcggaaccggaagcgaaaaaacaattgcacatcggttatccaattaaagacgaa
cccctcccgcttgcttccattcaagatgaagaacggcgcgtgacgattcaaggatatgtg
tttcaggcggaaacgcgtgagctaagaagcgggcgtatgctgttaacgtttaaacttacc
gattatacagactctttgcttgtgaaaatgttttccagagataaggaggacatcccgcta
tttaaagaagtgaaagcaggcaaatggctgaaagcaaggggcggtattcaagacgatacg
tttgtccgtgatctcgtcatgattgccaatgacgttacggaagttcaaatcgcgcggcgg
atggatgaagctcctgaaaatgaaaaacgcatcgagctgcacgcgcatacgacgatgagt
cagatggatggtgtggcttccccgggcgaaattgtggaaaaggcagcacaatgggggcat
gaagctgttgcaattacggatcacggggtcgtccaaggcttcccggaagctcattcggcg
gctaagaaaaatgatataaagttgctttacggaatggaagcttatctcgtcgatgacggc
gtgccgatcgcgtacaacgagagcgaacgagatctcgcggaatcaacgttcgtcgtcttt
gatgtggaaacaaccggactatcagccgtgtatgacacgatcattgaattggctgccgta
aaggtggcgaacggtgaaattgtcgatcggtttgaatcgtttgcgcagccccatgtgcct
cttcctgcgaagattacggaacttaccggcattaccgatgaaatgctgacagacgctccg
gaagtcagcgatgtcttgcaacagtttgccgattttgcgggcgacgcgggctttgtggca
cataacgcaagttttgatatcggctttatcaacgccggttacaaaaaagaaggatggccc
gaggtggaacagccggtcgtcgacacattggaacttgcccggtttttatatcccaatatg
aaaaatcatcggttgaacacgctttgcaaagcgtttgacattgaacttgtcagccatcac
cgtgccatttatgacacggaagccaccgcgtatctttttatcaaaatgattcgcgatgcc
aaggaacaaggaattgatcaacacggtcaactcaatgaaaatatcggccgaggcgatttt
tacaaaagcaggccttcccattgcacgattctcgtccaaaacgaaacaggtttgaaaaac
ttgtatcaacttgtgtctttatctcacttatcgtattttcaccgaacgccgcgaatcccg
aggtcgaagcttgtccagtatagggatgggttgcttgtcggatcgggttgcgaaaaaggg
gaagtctttgaaacaatgatgcaaaaatccgccgaagaggcggagaaagcggctcgtttc
tatgactttatcgaaattcagccaccggaaatccatggccatctattggaaaaagacatc
attagaagtgaagcacagctcttggacattatgcgaaaattgaacgatgtcggcgaacgt
ttggcgattcccgtcgttgctaccggaaacgtccattatttggagccggaggaccatatt
tatcgaaaaatcctcgtttcatcccaaggtggggccaacccgttgaacaaacaaacgatg
ccgaaggtgcattttcgaacgaccgcggaaatgctggaggccttttctttcctcggcgaa
gaaaaggcgcgccaagctgtggttaaggccccaaaaaagcttgcggatgagaccgaagat
atcgcaccggtccctagcggattatacgctccaaacatcgaaggtgccgacgaagaaatg
cggaggctcacctttggaaaagcaaggagcatttacggagaagatctgcctgccatcgtc
gaagagcgtctggaaaaggaattggaaagcattatcggccatggatatggcgtgatttac
ctcatttcgcataaactcgtcaaacgatccttggacgacggttatctcgttggctcccgc
gggtcggtcggctcttctttcgtggcgacgatgtcggacattaccgaggtcaatccgctg
cctccccattacgtttgcccgaactgcagccattctattttttatgacgatgggtcggtg
gcgtcggggtatgacttgccggacaaaccatgtgaacaatgtgggacctcgtatactcga
gaaggccatgacattccctttgaaacgtttctcggttttaaaggggacaaagttcccgac
attgacttgaacttttccggagaataccaggcacgcgcgcacgcctacacccgtgacttg
ttcggggatgacaaggtctttcgcgcgggaacgatcggcacggttgcggataaaacggct
tatggattcgtgcgcggataccaaaatgaccatcaaattgaccatatacgcggcgctgaa
atcgaccgcctcgtccatggttgcaccggggcgaaacgaacgaccggccagcatcccggc
gggatcattgtcgttcccggagataaagacatccatgatttttgtccggttcaatatccg
gctgatgataaaaacgcaagttggaaaacgacgcattttgattttcattccatcgatgac
aacttgttgaaacttgatattcttgggcacgatgatccgacggtcatccgtatgctgcaa
gatttgagcggaatcgaccctaacgatattcctgtggatgatcctgaggttatgcgtata
tttgaaggaccggaagtgcttggtgttactccggagcaaattctgtgcaaaaccggcacg
tacgggattccggagttcggcacccgtttcgttaggcaaatgttggaagaaacgaagccg
aagaagttttccgagctcctgcaaatttccggtttgtcccacggggccgatgtctggctt
ggtaatgccgatgaattaattcgtgatgggatttgtgagctgaaagacgtcattggcctc
agagacaacattatggtcaatctgatttataaagggctggaaccatcgctggcttttaaa
attactgaattcgtccgcaagggaagaggattggaacaagaatggattgacgaaatgaaa
aaccacggtgttccggattggtacattcagtcctgtttgaagatcaagtatatgttcccg
aaagcgcatgcggcagcatatgtactaatggcggtgagaatcgcgtatttcaaagtccac
catccaattctgttctacgccacctatttcagcgtaagggccagtgattttgagttggaa
acgatgcaaaaaggaagcgcggcgattcgggcgcgcatcgaagacattcaagccaaaggc
tttgacgcggcaccaaaagaaaaaagcttggtgactgtattggaactggcgctggaaatg
acggagcgcggattttcgttcggatcgattgatctctatcgatccgaagcaagcatgttc
atcgttgatggcgaaacgttgattccaccgtttggcgcgttggaaggggtaggcgctaac
gccgctaaaaacattgttgaagcacgtacagacggtgagtttttatcaaaagaggacttg
caacaaaaaagcaaagcgacgaagaacgtcatacaaattttgggcgcgagcggatgcctg
gaaggcatgccggattcgaaccagctttcgttgttctag
DBGET
integrated database retrieval system
