Salicibibacter halophilus: EPH95_03225
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Entry
EPH95_03225 CDS
T06083
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sale
Salicibibacter halophilus
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sale03032
]
EPH95_03225 (topA)
03400 DNA repair and recombination proteins [BR:
sale03400
]
EPH95_03225 (topA)
Enzymes [BR:
sale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EPH95_03225 (topA)
DNA replication proteins [BR:
sale03032
]
Prokaryotic type
DNA Topoisomerases
EPH95_03225 (topA)
DNA repair and recombination proteins [BR:
sale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EPH95_03225 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QDI90305
UniProt:
A0A514LFG7
LinkDB
All DBs
Position
complement(639337..641409)
Genome browser
AA seq
690 aa
AA seq
DB search
MADYLVIVESPAKAKTIGKYLGKKYTVKASMGHVRDLPKSQMGVDVDKRYDPKYITIRGK
GPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLAFSLGIDEETPCRVVFNEITKPAIQE
AFKNPRTINTDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSIAVKMINDREK
EIQQFEPEEYWNIKGTFSYGEETFDAQFHGKGKKKEALKTKEDVDEVLGQLKGDEFTIAS
VQKKERRRNPVQPFITSSLQQEAARKLNFRAKKTMMVAQQLYEGIELGKEGTVGLITYMR
TDSTRISETAKEEAKAYIQEKYGNQYVGADRKQKRQGENTQDAHEAIRPTFVAREPKAIK
DYLSRDQLRLYRLIWERMVASRMAPAIMDTMTADLENGGIIFRATGSKVKFQGFMRVYVE
GSDDSKKEENKLLPALEEGETAKKETLEPTQHFTQPPPRYTEARLVRTMEELGIGRPSTY
APTLDTIQRRGYVSLQDRRFVPTELGEIVLDLIVEFFPEILNVKFTAQMESDLDDVEEGN
ENWIEIIDTFYQGFEKRLKVADREMEEVEIKDEPVGEDCEKCGHPMVYKMGRYGRFMACS
NFPDCRNTKAILKPIGVKCPRCTEGNVVERKSKKQRTFYGCDRYPACEFVSWDKPIARPC
PKCQSLLVEKKAKKTVRVQCSECDYREDPN
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggattaccttgtaatcgttgaatctcccgctaaagcaaaaacaattggaaagtat
ttaggaaaaaaatatacggtgaaagcatcaatgggacacgtgcgtgatttgccaaaatca
caaatgggcgtagatgtggataagagatatgatccaaaatacattacgattcgcgggaag
ggcccggttttaaaagaattaaaacaagcggcgaagaaagcaaaaaaggtttaccttgct
gcggaccccgaccgtgaaggggaagcgattgcctggcatttggcattcagcttagggatc
gatgaagaaacgccttgccgggttgtgtttaatgaaataaccaagcccgcgattcaggaa
gcattcaaaaacccgcgcaccattaataccgatctcgttgatgcccaacaagcccgccga
attttggaccggctcgttggttacaacatcagtccgttgctttggaaaaaagtaaaaaaa
ggattaagcgccggacgtgtacaatcaattgccgtaaagatgattaatgaccgggagaaa
gaaattcaacagtttgaacctgaagagtactggaatataaaaggaacattttcgtatggt
gaagaaacattcgatgcccaatttcacggaaaaggaaagaaaaaagaggcattgaagaca
aaagaagatgtggatgaagtcctgggacaattaaaaggggacgaatttaccatcgcgtcc
gtgcagaaaaaagaacggcgccgcaatccggtgcagccgttcatcacctcttcgctccaa
caggaagcggcccgaaagctcaatttccgggcgaaaaagacgatgatggtagcccagcaa
ttgtatgaagggatagaattgggcaaagaaggcaccgtcggtttaatcacgtatatgcgt
actgattccacacgcatttctgaaacagccaaagaagaagcgaaagcctatatccaagaa
aaatatgggaatcaatatgtaggtgccgaccgaaagcaaaagagacagggagagaacacc
caagacgctcacgaagcgatccgtccgacgtttgtcgctcgtgagccgaaagcaatcaaa
gattacttgagccgggatcaattaaggctttatcgcctgatttgggagcgcatggtggcg
agtcgcatggcgcctgcgatcatggatacgatgacggctgatttggaaaatggcggaata
atcttccgggcaacgggatcgaaagtgaagtttcaaggttttatgagagtgtatgtggaa
ggtagcgacgatagcaaaaaagaagaaaacaaacttcttcccgcgctcgaagaaggggaa
acggcaaaaaaagaaacgttggagccgacccaacatttcacgcaaccgccgcccaggtat
acagaagcacgactcgtgcgcacgatggaagagcttggaatcggccgcccttccacttat
gctcccactctggatacgattcagcgacgcgggtatgtctcattgcaggatcgtcgtttc
gtaccgacggagctcggggaaattgtccttgatctcatcgttgagtttttcccggaaatc
ttgaacgtgaagtttaccgcccagatggaatcagacctggatgacgttgaagagggtaat
gaaaactggattgaaatcatcgataccttctaccaagggtttgaaaagcggttaaaagtt
gctgatcgagaaatggaagaagtcgaaatcaaagatgaaccggtaggggaagattgtgaa
aagtgcgggcatcccatggtttacaaaatgggaaggtacggaagatttatggcttgctcc
aactttcccgattgccggaacacaaaggcgatcctaaagccgatcggcgtaaaatgccca
aggtgtacagaaggaaatgtcgtggaacgaaaaagcaaaaaacaacgcacattctacgga
tgcgatcgttatccggcgtgtgaattcgtttcctgggataagccgattgcacggccgtgt
ccgaagtgccaaagcctcctcgttgagaaaaaagccaaaaaaacggtacgggtgcaatgc
tcggaatgcgattaccgcgaggacccaaactag
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