Salicibibacter halophilus: EPH95_04025
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Entry
EPH95_04025 CDS
T06083
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sale
Salicibibacter halophilus
Pathway
sale03420
Nucleotide excision repair
sale03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EPH95_04025
03430 Mismatch repair
EPH95_04025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sale03400
]
EPH95_04025
Enzymes [BR:
sale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EPH95_04025
DNA repair and recombination proteins [BR:
sale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EPH95_04025
MMR (mismatch excision repair)
Other MMR factors
EPH95_04025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QDI90451
UniProt:
A0A514LGQ1
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All DBs
Position
complement(823048..824817)
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AA seq
589 aa
AA seq
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MSITYHEITSDYLLEDVYNPFKVIAGPGAGKTYWLIQNIKHILRQSNRIGPTSKIACITY
TNVGANEILERLEIKENVVESSTIHSFLYKNLVSPYVYLLLNDGSEPLIDISRMDGHDEN
KAYSGLIHQWKSKYNIRYFDNSKETAKKIKNCLEDLHWTFDDNEELTLKTKKPYSPQIGK
YSIRQEDMLNYKKLCWSSGIIHHEDVLYFSYCLLKLYPLLREVLVARFPYMLLDEFQDTN
PIQTKIINWISESGAIIGVIGDPAQSIFRFQGASRQAFLDFHLPNQNNYTMNDNRRSGRG
IVNLLNNLRSDEITQNCKRTNIVDHVSFIECDGSDLKQTINTFNAKRKELNLKDDYCILA
RNNPTVAKLKNGQQIKPWKELEDKDSASRYRFLLSLLRAQEYGHKGMIEFAAKECIKTLR
TDSNNKLKEPFKEGHLTSLQKRSVSVSLLEFLITYRNENFESSVLDFYKELERFYLDLNL
KLKGVSNGGFKSFSEGTSVKVLVDDLKLPEEKNSEIRTIHKSKGAEFESVLVYLENIERL
LEPDINEEGDETRLIYVACSRTEKFLCIATPPLEIEEKEKINSLVDARS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgagtattacttatcatgagataacgtctgactatttattagaagatgtatataatcct
tttaaggtcatcgctggtccaggtgcaggaaaaacatattggttaattcaaaatataaaa
catattttaagacaatcaaatcgaataggaccaacatcaaaaatcgcttgcattacctat
actaacgtaggggcaaatgaaattttagaaaggcttgaaataaaagagaatgtcgtagaa
tcctcgaccatacacagctttttatataagaaccttgtaagtccatatgtttatttactg
cttaatgatggttctgaaccattaattgatattagcaggatggatggtcatgatgaaaat
aaagcttattctggattaatccatcaatggaaatcaaaatataatataagatattttgat
aatagtaaagagacagccaagaaaattaaaaattgcttggaggatttacattggactttt
gacgataacgaagaattaacactaaagactaaaaaaccttattcaccacagattggaaaa
tattctattaggcaagaagatatgctgaattacaagaagctttgttggtctagtggtatt
attcatcatgaagatgtactttatttctcttattgtttgctaaaattatacccactgctt
agagaggtattagttgctagatttccgtatatgttacttgacgaatttcaagacacaaat
ccaatacaaacaaaaataatcaactggatatccgaaagcggggcaataataggggtcatt
ggcgatcccgctcaatccatatttaggtttcaaggagcttcaaggcaagcctttttagat
tttcatcttccaaatcaaaataactatactatgaatgacaatagacgcagtggtagggga
attgttaatctattaaataacctgagaagtgacgaaataactcaaaattgtaaaaggaca
aacatagttgaccatgtgtcatttatagaatgtgatgggagtgatttaaaacaaactata
aatacattcaatgcgaaaaggaaagagttaaatttaaaagatgactactgtattttagca
cgaaataatccaacagttgcaaaactaaaaaatggacaacagataaagccttggaaggaa
ttagaggataaggattcggcaagtaggtatcgctttttgttatcactactacgagcccaa
gaatatggtcataaaggtatgattgagtttgcagctaaagagtgtattaaaacactccgg
actgattcaaataataaacttaaggaaccatttaaagaaggtcatctaacttcattacaa
aagagaagtgtatctgtttctttattggagtttttgattacgtatcgaaatgaaaacttt
gaatcaagtgttttggacttttataaggagcttgaaagattttatctagaccttaattta
aaattaaaaggtgttagtaatggtgggtttaaatcctttagtgaaggaacgtctgttaaa
gttctcgtagatgatctcaagttaccggaagaaaaaaatagtgaaataagaacaattcat
aagtcaaaaggggctgagtttgaatcggtattagtttatcttgaaaatattgagaggtta
ctcgaaccagatattaatgaagaaggggatgaaaccaggctgatatatgttgcatgtagc
aggacggaaaaatttttatgtattgcaactccgccattagaaatagaagaaaaggaaaaa
ataaatagcctagtagatgccaggagctga
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