Salicibibacter halophilus: EPH95_10205
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Entry
EPH95_10205 CDS
T06083
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sale
Salicibibacter halophilus
Pathway
sale03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EPH95_10205 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sale03021
]
EPH95_10205 (rpoB)
03400 DNA repair and recombination proteins [BR:
sale03400
]
EPH95_10205 (rpoB)
Enzymes [BR:
sale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EPH95_10205 (rpoB)
Transcription machinery [BR:
sale03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EPH95_10205 (rpoB)
DNA repair and recombination proteins [BR:
sale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EPH95_10205 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QDI91513
UniProt:
A0A514LI31
LinkDB
All DBs
Position
complement(2090500..2094042)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTGQLIQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGMRVMFQDISPIEDFTG
NLVLEFIDYSLGEPKYSVEDSKERDVTYSAPLRVKVRLMNQETGEVKEQEVFMGDFPLMT
DTGTFIINGAERVIVSQLVRSPSVYYNQKIDKNGKKGFTATVIPNRGAWLEFETDAKDIT
YVRIDRTRKIPVTVLLRALGFGSDQEIVDLIGENEFLRNSLEKDNTDDTEKALLEIYERL
RPGEPPTVDNARSLLESRFFDPKRYDLANVGRYKINKKLHIKERLFNQVLAETLADPETG
EILAEEGTLIDRRVLDRLLPFLEDGLGFKSYRIAGGMVDDESEVTVQSIKVFAPNDPDGE
QTIEVISNGTLDTDIKNITAEDIVASISYFFNLLHGVGGTDDIDHLGNRRLRSVGELLQN
QFRIGLSRMERVVRERMSIQDPSQITPQGLINIRPVIASIKEFFGSSQLSQFMDQTNPLA
ELTHKRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAKVN
EFGFMETPYRRVDPETGVVSERVDYLTADEELNYVVAQANARLTDEGTFADDHIIARFRE
ENTIVAKERIDYMDVSPKQVVSAATASIPFLENDDSNRALMGANMQRQAVPLLEPEAPIV
GTGMEYVSAKDSGAAITAIHRGVVKRVTAREIRMRRLEEVDGKEVETDEDVYRMSKFIRS
NQGTSYNQRPIVDGGDVIDKGEVLADGPSMDKGEMAIGRNVLLGFMTWEGYNYEDAIILS
ERLVKDDVFTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEIKD
GDILVGKVTPKGMTELTAEERLLHAIFGEKAREVRDTSLKAPHGGDGIVLDVKIFNREDG
DELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPIDMMLN
PLGVPSRMNIGQVLEMHLGMSARELGIHVATPVFDGAREEDVQESFEEAGIAEDGKTVLY
DGRSGEAYDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEM
EVWALEAYGAAYTLQEILTVKSDDTIGRVKTYESIVKGENVPEPGVPESFKVLIKELQSL
GMDVKMLSSNEEEIEMKELDDEEDQSSDKMNLKLESTENA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaacttattcagtatggacgtcatcgccagcgcagaagctacgcaagaatt
agcgaggtactagagcttcccaatctcattgagatccaaacgtcttcctatcaatggttt
ctcgatgaggggatgcgagtcatgtttcaggatatctcccctatagaagactttacgggt
aatctcgtcttggaatttatcgactacagccttggtgagccaaagtattccgtcgaagat
tccaaagaacgggatgttacgtattctgctccattacgtgtgaaagtccgtctcatgaac
caggaaaccggagaggtgaaggagcaggaagtatttatgggcgatttcccgctcatgacc
gataccgggacatttattattaacggggccgaacgtgttattgtttcccagcttgttcgt
tctcccagtgtttattataaccagaagatcgataaaaatgggaaaaaaggtttcactgcc
accgttatccctaatcgcggtgcttggcttgaatttgaaacggatgcgaaagatatcact
tatgtgcgtatcgaccgcacccggaaaattcccgtcacggttctattaagagcattaggc
ttcggctcggaccaggaaatcgttgatttaataggcgagaatgagtttctgcgcaattct
ttggaaaaagacaataccgatgacacggaaaaagcgcttttggaaatttatgagcgtctg
cgtcccggcgaaccgccgacggtagacaatgcccgcagcttgcttgaatcccgctttttt
gatccgaagcgatatgatttagcgaatgtagggcgttataaaatcaataaaaagctgcac
attaaagagcgcctctttaatcaagttttagcagagaccctcgcggatccggaaaccgga
gaaatcctcgcggaagaaggcacactcattgaccggcgcgtactcgatcggttgcttcct
tttctggaagatggcctcggttttaaatcctacaggatcgccggaggcatggttgacgat
gagagcgaagtaacggttcaatccatcaaagtctttgctcccaacgatccggacggtgag
cagacaattgaagtgattagcaatgggacgctggatacggatattaaaaacattactgcc
gaagacatcgtcgcgtccatcagctatttctttaacttgcttcatggtgtcggcggtacg
gatgatattgaccatttgggaaatcgccgtttgcgctcggtcggggaactgctgcaaaat
caattccgcattggcttgtcccgaatggaacgcgtcgtgcgcgaacgcatgtctattcaa
gatccaagccaaatcacgccgcaagggctcattaatattcggccagtcattgcttccatt
aaagagtttttcggaagctcccagctttcgcaatttatggatcaaacgaacccgcttgcc
gaacttacccataagcgccgcttgtctgcgctcggccccggcggtttgacgagggaacgt
gccggtatggaagttcgtgacgttcactattcccactacggtcgtatgtgcccgattgag
acgcctgagggaccgaatatcggcttgatcaactccttgtcctcgtatgcaaaagtgaat
gaatttggctttatggagacgccttatcggcgtgtcgatccggaaacaggcgttgtctcc
gagcgcgttgactatttaacggccgacgaggaattgaactatgttgtggctcaggccaac
gcgaggctgacggatgaaggtacatttgccgatgatcatatcattgctcgtttccgcgaa
gaaaatacaatcgtagcgaaagaacgcatcgattatatggacgtttcccctaaacaagtt
gtttcggcggcaacggcatctatccctttccttgaaaacgatgactccaaccgagcgctg
atgggggcaaacatgcaacgccaggctgtccctttattggagccggaggcccctatcgtc
ggaacaggcatggaatatgtttccgctaaggattccggcgcagccatcaccgctattcat
cgcggagtcgttaaacgggtgacggcaagagagatccggatgcgccgtctagaggaagta
gacggaaaagaagtggaaaccgatgaagatgtttaccggatgtccaagtttatccgttcc
aaccaaggcacaagttacaatcaacgcccgattgtcgatggcggcgatgtgattgataaa
ggagaagtgctggccgacggaccttccatggataaaggggaaatggcaatcggccggaat
gtgctgctcggttttatgacttgggaaggatacaactatgaagatgccatcattttgagt
gaacgacttgtaaaagatgatgtattcacctccattcatatcgaagaatatgaatcggaa
gcacgtgacacgaagctcggcccggaagaaatcactcgggatatcccgaacgtgggagaa
gatgctttacgtaacctggatgaacggggcattattcgtgtcggtgctgaaattaaagac
ggagacatccttgttggcaaggttacaccaaaggggatgactgaacttacggctgaagaa
cgtttgctccatgctattttcggtgagaaagcgcgtgaagtgcgcgatacgtcgttaaaa
gcgcctcacggcggggacggcattgtgctcgatgtaaagattttcaaccgtgaagacggc
gatgagctgccgccgggcgtcaatcagctcgtaagggtgtatatcgtgcaaaagcgaaaa
attcacgaaggcgataaaatggccggccgccacggaaacaaaggcgttatttcccggatt
ttaccagaggaagatatgcctttcatgccagatggcacgccgatagacatgatgttaaac
cccctaggagtgccttcgcggatgaatattggacaggtgctggaaatgcacttgggtatg
tccgcacgcgaactggggattcatgttgccacaccggtctttgatggtgcccgtgaagaa
gatgttcaggaatcgtttgaagaagcaggaatagccgaggacggcaaaaccgttttatat
gacggacgcagtggcgaggcttacgataaccgtgtgtctgtcggtgtcatgtatatgatt
aaactggcgcacatggtcgatgacaaacttcatgctcgttccaccggtccctattcattg
gtcacgcaacaaccgttgggcggaaaagcgcaatttggcggacagcgatttggcgagatg
gaagtttgggcacttgaagcctacggtgccgcttatacgttgcaagaaatcctaacggta
aagtctgacgatacgattggccgtgtaaaaacgtatgagtctatcgtcaaaggcgaaaac
gtcccggagccgggtgttccggaatcgttcaaagtgttgattaaagaactccagagcctt
ggcatggacgtaaaaatgctttccagcaatgaagaagagattgaaatgaaagagctggat
gatgaagaagaccagtcaagtgacaaaatgaacttgaaattggagtctacagagaacgca
taa
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