Salicibibacter halophilus: EPH95_12280
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Entry
EPH95_12280 CDS
T06083
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sale
Salicibibacter halophilus
Pathway
sale03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EPH95_12280 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sale03400
]
EPH95_12280 (uvrA)
DNA repair and recombination proteins [BR:
sale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EPH95_12280 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EPH95_12280 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_16
AAA_23
DnaJ_CXXCXGXG
Viral_helicase1
AAA_22
ATPase_2
nSTAND3
cobW
MMR_HSR1
Septin
Zn_ribbon_IFT122_C
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
QDI91857
UniProt:
A0A514LJ44
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All DBs
Position
2524764..2527634
Genome browser
AA seq
956 aa
AA seq
DB search
MAKDNISIKGARSHNLKGVDLTIPRDQLIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSQNPRSTVGTVTEIYDYLRLLFARVGVP
YCPNHNIPITSQSVQQMIDQLMSYPERTRLQILAPLEAERKGTHVKVFEDLKKKGFVRVR
VDGEIRDLSEDIALEKNKKHTIEVVIDRVIIKEGVESRLSGSLETGLEQSGGRVLIDVID
GDEVLFNQHHACPYCGFSVDELEPRLFSFNNPSGACPTCDGIGSKLETDEELVIPNESLT
LRQHAILPWMPTSSDYYPQLLEAACEHFGIDMDVPFEQLSKQDKKILLHGNRKERIYFRH
ENEFGNVRERKIYFEGVLKNISRRYYSTSSDYTREQMEQFMVRKACQACQGHRLKDEALS
VLLNGKHIGEVTDLSIDGAKGYMDTLDLSEKEMQIARLIIQEINNRLGFLSNVGIDYLTL
SRTAGTLSGGEAQRIRLATQIGSALMGVLYILDEPSIGLHQRDNMRLIRTLENMRDLGNT
VIVVEHDEDTMLAADHIVDIGPGAGVNGGHITAEGSPETISDQPESLTGEYLSGKKFIPL
PHRRRPATQRKLTVTGANANNLQNIDVDIPLGVFNVITGVSGSGKSTLINDILRKSLSQK
LHRAKEKPAKHKEIKGIDELDFVVNIDQSPIGRTPRSNPATYTGVFDYIREVFAMTNEAK
VRGYKKGRFSFNVKGGRCETCRGDGIIKIEMHFLPDVYVECEECGGKRYNRETLDIRYKG
KDIAEVLAMTVDEGVDFFENIPRIKRKLQTLKDVGLGYIKLGQQATTLSGGEAQRVKLAS
QLHRRTTGRSLYILDEPTTGLHMDDIRRLLQVLQRLVDNGDTVIVIEHNLDVIKTVDHII
DLGPEGGDGGGEIVATGSPETVAEAKHSYTARYLKPILEREEQRMEALEKDEAVVK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagataatatcagcataaaaggagcgcgttcccataacctgaaaggggtagat
ctaacaatcccccgtgatcagttgattgtttttaccgggttatcgggttcgggtaagtca
tcgctggcgtttgacacgatttatgccgaagggcaaaggcgatacgtagaatccttatcg
tcttatgcccggcaatttttaggacagatggataagccggatgtagattcgatcgaagga
ctgtccccggctatctccatcgatcaaaaaacgacaagccaaaatccgcgctccacagta
gggacggtcacggagatctatgattatttacggttattgttcgcacgtgtcggggtccct
tattgtccgaaccataacatccccattacttcgcaaagcgtccagcaaatgatcgatcaa
ttgatgagctatcccgaacggacccgccttcaaattcttgctccgttggaagccgagcga
aagggaacgcatgtaaaagtctttgaggatttaaagaaaaaaggatttgtgcgcgtgcgt
gtggacggggagattcgcgatttatccgaagacatcgctttggaaaaaaataaaaagcat
actattgaagtcgtcatagatcgggtaattataaaagaaggagtggagtcccgactctcc
gggtcattggaaacaggattggaacaatcgggagggcgcgtgctcattgacgttattgac
ggcgatgaggtgttgttcaaccaacatcatgcatgcccgtattgcgggttttccgttgat
gaattggaaccgaggttgttttcttttaacaatccatcgggtgcttgtccaacctgtgac
ggaattggctccaagttggaaaccgatgaagagttggttatcccaaacgaaagcctcact
ttgcgccaacatgccattcttccatggatgccgacaagttccgattattatccgcagctg
ctcgaggccgcctgcgaacatttcggcatcgacatggatgttccatttgagcaactttcc
aagcaggataaaaaaattttactgcatggcaatcggaaagaacgaatctactttcggcat
gagaatgagtttggcaatgtaagagaacggaaaatttattttgaaggtgtgttgaaaaat
atctccaggcggtattattccacctcttcggattatacgcgggaacagatggagcagttt
atggtccggaaagcttgtcaagcttgccaaggccatcggttaaaagatgaagcactttcc
gttttacttaatggcaagcatatcggagaagtgacagatctatccattgacggagccaaa
ggttatatggatacgcttgatttatccgaaaaagagatgcaaattgcccggctcatcatc
caggaaattaataatcggttgggatttttaagcaatgtgggcattgattatttaacgcta
agtcgtacggccgggaccctgtccggcggtgaagcgcaacgaattcggctggccacccaa
atcggctccgcgctaatgggagttctctatattcttgatgaaccttccatcggcttgcac
cagcgggataatatgcgattaatccgtacgcttgaaaacatgcgcgaccttgggaataca
gtaatcgtcgttgaacatgatgaagatacgatgcttgcggctgatcatattgtggacatc
ggccccggcgccggtgtaaacggcgggcatattactgcagaaggatctccggaaacgatt
agtgatcaacctgaatctctcacaggcgagtatttgtccggaaaaaaattcattccttta
ccgcacagacgacgtcctgcaacgcagcgcaaacttacggtcacaggcgcgaacgcgaat
aacttgcaaaatatcgacgtcgatattccgctcggtgtttttaatgtcattaccggtgtt
tccggctccgggaaaagcacgctcatcaatgatatattacgaaaatccctttcccagaag
ttacatcgggcgaaagaaaagcctgcgaaacacaaagaaatcaaaggcattgatgagctc
gattttgtcgtaaacattgaccagtcaccgatcggacgaacgccacggtccaatccggcg
acgtacaccggtgtatttgattatatccgcgaggtattcgccatgacgaacgaggcgaag
gtgcgtggttataaaaagggacgtttcagctttaatgttaagggcggccgttgcgaaacg
tgtcggggagatggcattattaagatagagatgcactttttgcccgatgtatacgtggaa
tgtgaagagtgcggcggaaaacgttacaaccgggagacgttggatatccgctacaaaggg
aaagatattgcggaagtgttggcaatgaccgtcgatgaaggcgtggatttttttgagaac
atccctagaatcaaacggaaattgcagacgttaaaagacgtgggccttgggtatattaag
cttggccaacaggccacaacgctttccggcggggaagcgcagcgagtgaagttggcctcc
caactgcacaggcgcacaaccgggcgctctctctacattttggatgaacctaccaccggt
cttcatatggatgatattcgccgcctattgcaagtattgcaacgtctcgttgataatgga
gatacagttatcgtcatcgagcataacctggacgtcattaaaacggtcgatcatattatt
gatcttgggcctgaaggtggtgatggcggcggtgaaatcgtcgcgacaggttcccccgag
acagtcgccgaagcgaaacactcttacaccgcccgatatttaaagccaatcttggagcgg
gaagaacaacggatggaagcgttggaaaaggatgaagccgtcgttaagtga
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