Salvelinus sp. IW2-2015 (Arctic char): 111952403
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Entry
111952403 CDS
T05762
Name
(RefSeq) NT-3 growth factor receptor
KO
K05101
neurotrophic tyrosine kinase, receptor type 3 [EC:
2.7.10.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111952403
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111952403
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111952403
Protein kinases [BR:
salp01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
111952403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
LRRCT_2
Ig_3
ig
LRR_8
Ig_2
C2-set_2
LRR_5
LRRNT
Haspin_kinase
TrkA_TMD
LRR_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
111952403
NCBI-ProteinID:
XP_023826791
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Position
LG26:complement(16043758..16336655)
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AA seq
816 aa
AA seq
DB search
MDSFFIPPRICWWRVLFILTIFQDYLSNMLDCPPTCSCSPTEIYCNKSDNGKFFPLLALQ
DTGNNGNNSIEDVFKNITSIHIENWTGLQTLKDVDMELYTGLQRLTIMNGNLRGIQARAF
SQNPHLRYINLSKNPLTTLSWQLFQNLQLFELRLEEVVFECGCDIRWIQLWQQRGEAGLH
TQLLFCNNGASKIPLQAMNISLCDLPDISVTHFNLTVVEGDRVTVTCNGSGSPLPEVDWT
VNDLHSINTHQSNVYWPNVHSINLTLVNVSRDDNFYILTCIAENKVGMANTSIQLTVHFP
PTILKLDEPERRHETCIEFTVRGNPQPTLRWFHRDNEISPSDYIRTEMDTYQDYLEGCLN
FKDPTHHNNGNYTLEASNFLGVTTKTVYGHFLNAPFPDDYGDYGTPTPTITVTHRPEEDT
FGVSIAVGLAGFACVLLVVLFVLINKYGRRSKFGMKGPVAVISGEEDSASPLHHVNHGII
TPCTLDAGPDAVVIGMTRIPVIENPQYFRHGHNCNKPATYVQHIKRRDIILKRELGEGAF
GKVFLAECYNLSPTKDKMLVAVKTLKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCVD
GDPLIMVFEYMKHGDLNKFLRAHGPDALILVDGQSLQTNGELGLSQMLHIATQIAAGMMY
LASQHFVHRDLATRNCLVGNGLLVKIGDFGMSRDIYSTDYYRVGGHTMLPIRWMPPESIM
YRKFTTESDVWSFGVILWEIFTYGKQPWFQLANNEVIECITQGRVLERPRACPKEVYDIM
LGCWQREPQQRLNIKDIQKILYALGKATPVYLDILG
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggattcattttttattccaccacgaatttgctggtggagggtattgtttattttgacc
atctttcaggactacttgagcaatatgctggactgcccgccaacctgcagctgttctcca
actgaaatctattgcaataagtctgacaatggaaaattctttcccctgcttgcactgcaa
gatactgggaacaatggaaataacagtatcgaagatgtgttcaagaacatcacctcaata
cacattgagaactggactggcctgcagacgctgaaagatgtggacatggagctgtacact
ggacttcagagactaacaatcatgaacggcaacctgcgaggtatccaggccagagccttc
tcccagaacccccacctgcgctacataaacttatcgaagaaccctctgaccacattatca
tggcaactcttccagaatctgcaactcttcgagctgaggctggaagaagtggtgtttgag
tgtggctgtgatatccgctggattcagctgtggcagcagcgaggggaggctggcctgcac
acccagctgttattctgcaacaacggagcctccaagatccctctgcaggctatgaatatc
tcactctgtgacttgccggacatcagtgtgacgcactttaacctcacggttgttgagggg
gacagagtcaccgtcacctgtaatggatctggatcccccctccctgaggtggactggacc
gtcaatgacctccactccatcaatactcaccagtccaatgtgtactggcccaatgtccac
tccatcaatctgaccctggtcaacgtgagtcgtgatgacaacttctacatyctgacctgt
atagcagagaacaaagtggggatggccaacacctccattcagcttactgtccatttcccc
cccaccatcctgaagctggatgagcccgagcgtcgccatgaaacctgcatagagttcact
gtgcgtggcaacccccagcccaccctgcgctggttccaccgggacaacgagatctccccc
agtgactatatccgcactgaaatggatacctaccaggactacctagagggatgcctcaac
ttcaaggaccccacgcaccacaacaacggcaactacactctggaggctagcaacttccta
ggagtcaccaccaagacagtgtatggacacttcctcaacgccccatttccagacgattat
ggtgattatgggactcctacaccgaccatcacagtaacacacaggcccgaggaggacacg
ttcggggtgtctattgctgtcggcctggctggatttgcctgtgtccttcttgttgtcctg
tttgttctcatcaacaaatatggacggcggtcaaagtttggaatgaaaggaccagtagca
gtgatcagtggtgaggaagactcggctagccctcttcaccatgtcaaccatggcatcatc
accccctgtacccttgacgctgggccagacgctgtggtcatcgggatgacccgtatccct
gtcattgagaacccgcaatacttcagacacggacacaactgtaataagcctgctacctac
gtgcaacacataaagcgtcgggacatcattctgaagcgggagctgggagagggggccttt
gggaaggtgttcctggcagagtgctataacctcagccctaccaaggacaagatgctggtg
gctgtcaagacgctgaaggaccccacccttgcagcgagaaaagatttccagagggaggcg
gaactattgacgaacctgcagcacgagcacattgtcaagttctacggtgtgtgtgtggat
ggagaccccctcataatggtctttgagtacatgaagcacggagacctcaataagttcctc
agagctcatgggcctgatgcgttgatcctggttgacggacagtcgctgcagaccaatggg
gagctgggcctgtctcagatgctgcacattgccactcagattgccgcggggatgatgtac
ctggcctcccagcactttgtgcaccgtgacttagccactcggaactgcctggtgggcaac
ggcctgctggttaagattggtgactttggaatgtccagggacatttacagcacagattac
tacagggtgggaggccacaccatgctgcccatccgctggatgccccctgagagcataatg
tataggaagttcaccacagagagcgacgtgtggagcttcggtgtcatcctctgggagatc
ttcacctacgggaagcagccatggtttcaactggccaacaacgaggtcatcgagtgtatt
acgcaaggacgggttttggagaggccacgagcttgtcccaaggaggtgtatgacatcatg
ttgggttgctggcagagggagccccagcagaggctgaacatcaaggacatccagaaaatc
ctttatgccttgggcaaagccacacctgtctacctggacatcctgggctag
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