Salvelinus sp. IW2-2015 (Arctic char): 111952571
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Entry
111952571 CDS
T05762
Name
(RefSeq) tropomyosin alpha-1 chain-like isoform X1
KO
K10375
tropomyosin 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04260
Cardiac muscle contraction
salp04261
Adrenergic signaling in cardiomyocytes
salp04814
Motor proteins
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111952571
04820 Cytoskeleton in muscle cells
111952571
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111952571
04261 Adrenergic signaling in cardiomyocytes
111952571
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111952571
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
111952571
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
Crescentin
ATG16
CENP-F_leu_zip
DUF3450
Laminin_I
TMF_DNA_bd
HrpB7
ERM_helical
Nuf2_DHR10-like
FPP
ADIP
Exonuc_VII_L
NPV_P10
Fez1
DUF1664
GAS
DUF4200
Motif
Other DBs
NCBI-GeneID:
111952571
NCBI-ProteinID:
XP_023827160
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Position
LG26:12085247..12111645
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AA seq
284 aa
AA seq
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MEAIKKKMQMLKLDKENAIDRAEQAETDKKAAEDKCKQLEDEVLSLQKNLKGTEDELDKY
SESLKDAKEKLEQSEKTAADAEGDVAGLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEMQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERAE
ERAEVSELKCSDLEEELKNVTNNLKSLEASSEKYSEKEDKYEEEIKVLSDKLKEAETRAE
FAERTVAKLEKFIDDLEEKLAGAKEENLGMHQVLDQTLQELNSL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgcagatgctgaagctggacaaggagaacgccatcgac
cgcgcagagcaggctgagaccgacaagaaggcagcagaggacaagtgcaagcagctggaa
gacgaggtgctgagcctgcagaagaacctgaaggggactgaagacgagctggacaaatac
tctgagtccctcaaagacgccaaggagaaactggaacagtctgagaagaccgccgcagac
gcggagggtgatgtggcgggtctgaaccgcaggatccagctggtggaggaggagttggac
cgggcccaggagaggctggccactgcgctgcagaaactggaggaggccgagaaggctgcg
gacgagagcgagagaggcatgaaggtgatcgagaaccgggcctccaaggacgaggagaag
atggagatgcaggagatgcagctaaaggaggccaaacacatcgctgaggaggccgaccgc
aaatacgaggaggtagcccgtaagctggtaatccttgagggagaactggagagagctgag
gagagggccgaggtctcagaacttaaatgcagtgatctggaggaggagttgaaaaatgtg
accaacaacctaaaatccctagaagcctcatctgagaagtactcagaaaaagaggacaag
tatgaagaggagatcaaggttcttagtgacaagctgaaggaggctgagactcgtgcagag
tttgcagagaggacagtggccaaactggaaaagttcattgatgacctggaagaaaaatta
gcaggtgccaaagaagagaacctgggaatgcatcaagtcctggatcaaacactgcaagag
ctcaacagcttataa
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