Salvelinus sp. IW2-2015 (Arctic char): 111952691
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Entry
111952691 CDS
T05762
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111952691
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111952691
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
111952691
Nuclear receptors [BR:
salp03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
111952691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111952691
NCBI-ProteinID:
XP_023827354
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Position
LG26:complement(35010528..35037412)
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AA seq
485 aa
AA seq
DB search
MNEWVGPEVNVVGPLQIPHNDGFPLSENSHFFDILAEQGSPLLQDQEVLSFTNYPNMQYP
LVEPTMSSPPYYSNQHYYPQYSVEEWYSPTEIYELRKEPLEGSYNVEMEEASAIVPAVCK
RTRHTSHAGRVKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSKGTCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKASPGESTWDETEGGDNG
DSKQVTSTTKLSKEKVELSQEQQAILSFIVEAYQKHRIPQDMAKKLLQEHFNADENFLLL
TEMATSHVQVLVEFTKNIPGFSALDHEDQIALLKGSAVEAMFLRSAQVFTRKLPHGHTEV
LEDRIRKSGISEAFITPMFNFYKSIGELQMMQEEHALLTAITILSPDRPYLKDQQAVERL
QEPMLEVLRRFCAMQHPLEPQHFARLLGRLTELRTLNHHHAEMLTSWRMSDHKFTPLLCE
IWDVQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggccccgaagtcaatgtggtgggaccactacagatcccacacaac
gatggattcccattgtccgagaactcacacttctttgatattctggcagagcaagggagc
cctttgcttcaggaccaagaggtcttatccttcaccaactatcccaacatgcaatacccc
ttggtggagcccaccatgtcctcccctccatactactccaatcagcactactacccccaa
tacagcgttgaggagtggtactcacccacagagatttatgaactgaggaaagaacccctg
gagggtagctataatgttgaaatggaagaggcatccgccatagtgcctgcggtgtgcaag
aggaccaggcacacttcccacgcaggcagggtcaaaggggaggagctgtgtgtggtgtgt
ggggacaaggcatctgggtaccactataacgctctcacctgtgaggggtgtaaaggcttc
ttcagacggagcatcacaaagaacgccgtgtacaagtgcaagagtaaagggacctgtgag
atggacatgtatatgcgcaggaagtgccaggagtgtcgtctccggaagtgcaaggagatg
ggcatgctggcagaatgtctgctgacagagatccagtgtaagtctaaaaggctgaggaaa
aacaccaaggcctccccaggagagtccacttgggacgagacagaggggggagacaacgga
gacagcaaacaggtcacctccactaccaaactgtcaaaggagaaggttgagctcagtcaa
gagcagcaggctattttgagcttcatcgtagaagcttaccagaaacatcgaatccctcaa
gacatggccaaaaaactgctacaggagcatttcaatgcagacgagaacttcctccttttg
acagagatggccaccagtcatgttcaagtgctggtggagtttaccaaaaacattccaggt
ttctctgccctggaccatgaggatcagatagctctgttaaagggctcggcagtggaggcc
atgttcctgcgctcagcacaggtgtttaccaggaagctaccccatggacacacagaggtc
ctggaggacaggatccgcaagagtggaatatcagaggcgttcattacacccatgttcaac
ttctacaaaagcatcggggaactccagatgatgcaggaagaacacgcccttctcaccgcc
attaccatcctgtcaccagaccggccatacctgaaggaccagcaggcagtggagaggcta
caggagcctatgctggaggtgctcaggaggttctgtgcaatgcagcacccgctggagccc
cagcactttgcccgtctcctgggacggctgaccgaactgcgaaccctcaatcaccaccac
gctgagatgcttacctcttggcgcatgagcgaccacaagttcacccccctcctctgtgag
atctgggacgtacagtga
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integrated database retrieval system
