Salvelinus sp. IW2-2015 (Arctic char): 111953249
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Entry
111953249 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
111953249
Enzymes [BR:
salp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
111953249
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Motif
Pfam:
Sulfotransfer_3
Sulfotransfer_1
DUF4962
DUF4363
Motif
Other DBs
NCBI-GeneID:
111953249
NCBI-ProteinID:
XP_023828162
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Position
LG27:complement(13339212..13344471)
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AA seq
1219 aa
AA seq
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MSWTMAKKWIGCYIFLLALLAVGMAFSGVFNASEKYIFTDDLVPLKLTQGKASEHRKLQS
TDSHPNLYFNQVDVQLMRQRSSSTHSHIFKVIRAAVLTMLSNVPLYMPPAKHEEFTSKWN
EIYGNNLPPLALYCLLCPEDSGALQFLXKFMDXMAXYPXWKVXRAPNEEVPXAHSLTGFA
TAYDFIYSLLDEHXRDVYLKRIRSETEELYETSKYRGWGKQYLQNHQTTNILAILTGAIV
VXTHEDPXTMVWKQVSVNYMEKTMFLLNHXVEGSLDEGVAXGSXTAKSITQYVFLAQRHF
NIDNTQNNWLREHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDTFVIRNGTGN
WLAQQIRKHRPKDGPMGQSSAQRWTTLHTEYIWYNAHLTAQPPHGFGKARMHIFSNWGVV
TYGAGLPNGQGNTFVSFKSGKLGGRAVYDIVHAKPYSWLDGWNSFNPGHEHPDQNSFTFA
PNGQVFVSEALYGPKYSYLNNVLVFGPSPSSQCNAPWEGQLGECAKWLRWTDEGVGDAAG
ELIAASSHRDTMFVSGEAAPAYSPAMRLRSVYRALVLLNSQTLLVLDHVEKLDDSPITSQ
SAFFHNLDIDFKYVPYKFMDKYNGALMDVWDAHYKMFWFDSQGLSPDTRIQEAEQAAEFK
KRWTQYVNVTFPMRGTVSRVAYVMHGPYVKVSNCRFLDSSKNGVRLSLVINNTEKIVSVV
TNYKDIGTRLSYLGFGGYAKMEDRHQIIRYGLGTQLVPKQNTVDNQLFDFGFTVNVIAGV
ILCVAIVFLTLQRKFYVCFSRLMRYALFSVLILWIAALLFVSNTCDQLLCGVKWKGVSTD
PEVSKQIRLYDQHRFALPTVVITTLPGSGSEILKNLFDNSSDFVYIRVPTEHVDIPETEF
EFDSLVDACEWSRTDALRGHFKIIQGWLHSLVHNTKLHLQNIQLVESSRAKLPQRAPGPG
SDRRKRTRRKEPAAELRGKMRGSLDRDAEYVREMRRHVSEYPNARVVLNMRSGSWGLKLP
FLQEVVGPSLRAINVVRDPRAWIYLMLYNSKPSFYSLKNIPQHLSLIFKEDGNSSSTRDR
CPVSAPEFRMIRRLLSHSEASAVLLLAHLWLAHTAAVLRVSGSLQAEAYLQVRFEDIVTF
PQETAERIHRFLGVPVTPSALNQLMFTTSTNLYNLMYEGDISPANINIWRQNMPRKDIRL
IEDTCGVVMKRLGYSRFIS
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggaccatggcaaaaaagtggatagggtgctatatatttttactggcactcttg
gcagtgggaatggctttttcgggtgtattcaacgcatccgaaaaatatatttttacggat
gatttggtgccgctcaaactcacccagggtaaagcatcagagcatcgaaaacttcaatct
accgattctcatcccaacctgtatttcaaccaagttgatgtacagcttatgaggcaaaga
tcgtccagcacacacagccacattttcaaagtaatcagagcagcggtcctgaccatgctg
tccaatgtgcccctttacatgccccctgcaaaacatgaggagtttactagcaagtggaat
gagatttacgggaacaacctacccccccttgctttgtactgcctgctgtgccctgaggac
tcaggtgccctgcagtttctcatsaagtttatggatayaatggcayattacccgmkctgg
aaggtgarcagrgctcccaatgargaggtgccswtggcacactcactractgggtttgcc
ackgcktatgactttatttactcmttrctmgatgagcackgacgggatgtttacctcaag
agaattcgctctgagacagaggagctgtatgaaacatctaagtataggggctgggggaag
cagtatctccaaaatcatcaaaccactaatatattagcratcttgactggggcrattgtg
gtcygcackcatgargacccagkaacaatggtrtggaaacaggtytcagtcaattatatg
gagaagaccatgtttctcctaaaccacyttgtggargggtcactygatgagggrgtmgcw
targgyagctaracygccaagtcmatcacgcagtatgtmttcttagcmcaacgtcatttc
aacattgacaacacacagaacaactggctgcgggaacacttctggttctactatgccact
ctgctgcccggctttcagaggactgtgggcatagccgactccaactacaactggttctac
ggcccagagagccagctggtgttcctagacacatttgttataagaaacggcactgggaac
tggctagcccagcagattagaaagcacaggcccaaggacggtcccatgggtcagtcctct
gcccagcgctggactaccctacacactgagtacatctggtacaatgcccatctcacggca
caacctccccatggctttggcaaagccaggatgcatattttctccaactggggtgtggtg
acgtacggagccgggctgcccaacggtcagggaaacacatttgtctcctttaaatctggg
aagctgggtggccgtgccgtgtatgacatcgttcatgcaaagccctattcatggctggac
ggctggaatagcttcaacccaggccacgagcacccggaccaaaactccttcacttttgcc
cctaatggacaggtatttgtgtctgaagcactttacgggcctaagtacagttatctgaac
aatgtgctggtgttcggcccctctcccagcagccagtgtaacgctccatgggaaggccag
ctgggggagtgtgctaaatggctgcgctggacagatgaaggggtaggggatgctgctggg
gagctgatcgctgcctcctcccatagagacactatgtttgtaagcggggaggcagcccca
gcttactctcctgccatgcggctgaggagtgtgtacagggcccttgtgctgctcaactcc
cagaccttgctcgtactggaccatgttgagaagctggacgattcgcccatcacctcgcag
agtgcgttcttccacaacctcgacattgactttaaatatgtcccctataaattcatggac
aagtacaatggggcattgatggatgtgtgggatgctcattataaaatgttctggtttgac
agtcagggtctcagcccagatactaggatacaggaggccgagcaggctgcggagttcaaa
aagaggtggacacagtatgttaacgtcactttccccatgaggggcacagtaagccgagtg
gcctatgtgatgcatggaccttatgtcaaagtctccaactgtcgatttctggacagtagc
aaaaatggtgtcagactatctctagttataaacaacacagagaaaattgtttcagttgtt
acaaactataaagacataggaacaagattaagttatttaggatttgggggttatgccaaa
atggaagacagacatcagatcattcgatatggcctggggactcaactggttccgaaacaa
aacacagtggacaatcagctgtttgattttggattcacagtcaatgtgatagcgggggtg
atactttgtgttgctattgtttttttgaccctgcagagaaagttctatgtgtgcttcagt
agactgatgcgctatgctctgttctcggtgctcatactgtggatagctgcgttgttgttc
gtgtcaaacacctgcgatcaactcctatgtggggtcaaatggaaaggtgtcagcactgac
ccagaggtcagcaaacaaatcagactttatgatcagcaccgctttgccctgccaacagtt
gtcataacgaccctgcctggctcaggatctgaaatacttaagaacctttttgacaacagc
tccgactttgtttacattcgggtccccacggagcatgtagacattccagagaccgaattc
gaatttgactcgctggttgatgcctgtgagtggtccagaacggacgccctgcgcggacac
tttaaaatcatccagggctggctgcactctctggtccacaacaccaagctgcacttgcag
aacatccagctagtggagagtagcagggccaagctgccccagagagccccaggccccggc
agtgacaggaggaagaggaccaggaggaaggagcctgccgcggagctgaggggcaagatg
aggggcagccttgaccgggatgctgagtacgtcagggagatgaggcgccacgtcagtgag
taccccaatgcccgcgtggtcctcaacatgaggagtggaagctgggggctcaaactcccc
ttccttcaggaggtggtgggcccgtccctgagggccatcaatgtagtcagagacccccgg
gcgtggatctatctcatgctctataacagtaagcccagcttttactcccttaaaaacatt
cctcaacacctgtccctgatattcaaggaggacggtaacagtagcagtaccagggacagg
tgcccagtctcagcccctgagttcagaatgatccggaggctcttgtcccactcagaggcc
agcgccgtcctcctactggctcacctgtggctggcacacactgccgcagtgctccgggtc
agtgggagcctccaggcagaggcctacctccaggtgaggtttgaggacatagtcactttc
ccccaggagacagctgaaaggatccacaggttcctgggggtgccggtcacaccgtcggcc
ctcaaccagctcatgttcaccacctccacaaacttgtacaacctgatgtacgagggggac
atatcaccagccaacattaacatatggaggcagaacatgcctcgcaaggacatcagactg
atagaggacacatgtggggtggtcatgaaaagacttgggtactccaggtttatcagctag
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