Salvelinus sp. IW2-2015 (Arctic char): 111953720
Help
Entry
111953720 CDS
T05762
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
111953720
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111953720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111953720
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
111953720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
TMEM154
LapA_dom
LST1
DUF7237
Protocadherin
FAM176
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
111953720
NCBI-ProteinID:
XP_023828939
LinkDB
All DBs
Position
LG3:26201306..26222398
Genome browser
AA seq
611 aa
AA seq
DB search
MTSLLGGLTPLLWILGSFIAVVQGDFEEPSPGFSVQSLTEVETRLPCRFKVEVGQVVVQV
TWTKERADGTKDQIITVHHTAGQTEFGQYSGRVRFRSNEPTVDSSLIIMNTEESDEGRYN
CHISTFPSGNFERQLSLTVWTTPISSLDPVILVEGQSFRLAASCRSVARPPPILNWDTDL
TGLSQNRSSVGGSVSTHFSLHPLRSMNGMRLDCLVRHSTLKEPRRITNNLVVHYPPNAEI
SGFNQNWYAGLEGAALSCVSGGNPKPQRFTWTRKGGDLPEGVTAGNGSLLFNRPLGLTDA
GIYQCVAYNVVGTGKAEVEITVTEFLQKPVFFNSLLMIIIGGVAGGLLLIMVIIVISVTR
HHKRKNKKLERELTVKKEEISTLSRQASFRRVNSVSTDARGQMEENIPLRVEGTLRTSLS
SLGELGRIRDSRSTLVGGGGLDYLGRPVLNNSSRRGRENRAMDREEENRLRVESYVRNST
MSLGTRLHLPIQPSPFPMEHSTMLLRSLNGSVIIPTEGGLHARNSPLSYPPVTDDEEEEG
ESVEGERGTSSRMSRLDQGRSEDQDNSSQISDAERGHNHPFQQNNGTLRPKPRPNGIPSP
HASLIHKAQIV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgctcctgggcggactgacaccgctgctgtggatccttgggagtttcattgct
gtggtgcagggggactttgaggaaccatctcccgggttctcggtgcagtccttgaccgag
gttgagacccggctgccctgccggttcaaggtggaagtgggccaggtggtggttcaggtc
acctggaccaaggagagagcagatggtaccaaggaccagatcatcacagtacaccacact
gccggacaaacagagtttggtcagtactcggggcgtgtgcggttccgcagcaatgagccc
acagtggactcgtctctgatcatcatgaacactgaggagtcagatgagggcaggtacaac
tgtcacatcagcaccttcccctcggggaactttgaacgacagctgtcactcaccgtgtgg
accactcccatctcctccctggaccctgtgattcttgtcgagggccagtcctttcgattg
gctgcctcctgccgctccgtggcccgccccccgcccatcctcaactgggacacagacctg
acgggcctgtcacagaacaggagctcggtgggcgggtcagtctccacccacttctccctg
caccccctgaggagtatgaacgggatgagactggactgtctggtgaggcactctactctg
aaggaaccccgcaggatcaccaacaacctggtggtgcactatcctcccaatgcagagatc
tcggggtttaatcagaactggtatgctggtctggagggagctgccctcagctgtgtcagt
ggaggaaaccccaaaccacagcgtttcacctggaccaggaagggtggagacttaccagag
ggcgtgacggcagggaatggatccctgctgttcaataggcccctcggcctgacagacgct
ggtatctaccaatgtgtggcctataacgttgtggggaccgggaaagcagaggtggagatc
actgtgacagagttccttcagaagccggtgtttttcaacagtctcctgatgatcataatt
ggaggggtggctggaggactgctactcatcatggtcatcatagtaatctcagtgacccgt
caccacaaacgcaaaaacaagaaactggagagagaattgactgtgaagaaggaggagatc
agtactctctccaggcaggcctctttcaggagagtcaactcagtcagtacggatgctaga
ggacagatggaggagaatatccctctcagagtggaggggacactgcggaccagtctgtcc
tctctaggggagctagggcgcatcagggacagtcgctctactctggtagggggaggtgga
ctagactacctgggtcgacctgttctgaacaactcttcacgacgagggagggagaacaga
gccatggacagagaggaggagaacagacttagggtggagtcatacgtacggaatagcact
atgtctttgggaacccgtctccatctgccaatccaaccctctccctttccaatggaacat
tccaccatgctgctgaggtccctgaacggcagcgtcatcatcccaacagaggggggttta
catgcacggaactcccctctcagctaccctcctgtcacagacgacgaagaggaggagggt
gaaagtgtggagggagagcgggggacaagctccaggatgagtcggttagatcaggggagg
tcagaggaccaggacaacagttctcagatctcagacgcggaacgtggacacaatcatccc
ttccagcagaacaacggaacgctgagacccaaaccccggcccaacggcatcccatcccca
cacgcctccctcatccataaggcccagattgtatag
DBGET
integrated database retrieval system
