Salvelinus sp. IW2-2015 (Arctic char): 111953797
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Entry
111953797 CDS
T05762
Name
(RefSeq) tumor necrosis factor ligand superfamily member 12
KO
K05474
tumor necrosis factor ligand superfamily member 12
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111953797
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111953797
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Tumor necrosis fators
111953797
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
DUF2681
DUF7769
DUF5360
Motif
Other DBs
NCBI-GeneID:
111953797
NCBI-ProteinID:
XP_023829067
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Position
LG3:26432646..26446799
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AA seq
253 aa
AA seq
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MVTGECGTTMHRILRRRKVRKLRFVWAFMAMVALSLSACSALFTAWTWRQTRDLSQSLKT
LQDRLEQVNTQRKAIVQLIMEKRDLLVGQRVKRDEGTGKGKNGHGKKVASQFEITKESVQ
KVGEDGLIKGWTDSEHLNMSKAVKYNADRGIFTVEKTGVYFLYCQVLFNENQSQLVKLDV
AVVRGSQRLQRLQCMEGYGTTPAAGSHQFHFLKPCQVSGLLRLEKGVELKAITGPAFNLH
ITGKHYFGLFKVN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccggggaatgtggaacaaccatgcatcgaattctgcggaggagaaaagtgcgc
aaacttcgcttcgtctgggcattcatggccatggtggctctgtcgctctccgcctgcagc
gcactgtttacggcgtggacctggagacagacgcgggacctgtctcagtcattaaaaact
ctgcaagaccgattggagcaggtgaatactcagcggaaagccattgtccaactcatcatg
gagaagagagatttgctggtgggacaaagggtgaagagagatgagggaactgggaaaggg
aagaatggacatggaaagaaagtggcttctcagtttgagataaccaaagagtctgttcag
aaagtgggagaggacggcttgataaaaggatggacggactccgagcacttgaatatgagc
aaggcggtgaagtacaacgcagacagaggcatcttcacagtggagaaaacgggagtctac
ttcctgtactgtcaggtgttgttcaatgagaaccagtctcagctggtgaagctggacgtg
gcggtggtgagggggagccagcggcttcagaggttacagtgcatggagggctatgggact
acgcctgcagccggatcacaccagttccacttcctcaaaccctgccaggtgtccggcctg
ctgcggctggagaagggggtggagctaaaagcaatcacaggccccgctttcaacctccac
atcacgggaaagcattacttcggtctctttaaggtcaactga
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