Salvelinus sp. IW2-2015 (Arctic char): 111953844
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Entry
111953844 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: vascular endothelial growth factor receptor 1-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
salp04510
Focal adhesion
salp04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111953844
04020 Calcium signaling pathway
111953844
09133 Signaling molecules and interaction
04518 Integrin signaling
111953844
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111953844
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111953844
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111953844
Protein kinases [BR:
salp01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
111953844
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
Ig_VEGFR-1-like_5th
VEGFR-2_TMD
V-set
Ig_PDGFR_d4
Ig_4
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
111953844
NCBI-ProteinID:
XP_023829114
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Position
LG27:1412274..1448841
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AA seq
885 aa
AA seq
DB search
MFFRVRLKDGKVAAEECSRYHVDGNSLVIRDVAKEDAGKYTILVGIQEHRLYQNLTLSLV
VNVSPGIGEKAVSVQDPGSVPRGSRQALHCTSHGVPPPHITWLWHPCPPKGLCVCPPSSS
MWSPVKERAPGTSTDNHILSVTHRQEVLQGKNKTVGVLMVAEAFVSGVYRCIASSSVGKD
ELDMPFYVTDVPGGFSVSQEDEPREGGDLHLTCVANKHLYTNFSWQRVTDPAEATPLTPS
LGGELTSGEFSDTLSLLLSNLTAGDSGTYRCSAHHLLTGQNTHLDTQVDVTVLEAPVLLQ
NLSDCSVNISSSVTLSCHAHGVPRPFITWYKDQHTLLQGSGIVIAQGGENLHIDRITVED
QGLYTCQATNERGSAESSAYIWVHNSSGGLSLEIPTLTCTCLVATLFWLLLTLFIRKLKK
PNSSSAKAEYLSIILDPGEGPLEEQCDRLQYDPGQWEFPRDRLKLEKPLGRGAFGKVMQA
SAFGIDNSTGCRTVAVKMLKEGATPSDHKALMTELKVLNHIGHHLNVVNLLGACTKAGPL
MVIVEYCRYGNLSTYLRGKRETCSCSQGSHLLQFPRFSSMRFLASRKCIHRDLAARNILL
SEDKVVKICGLWSARDLYKDLDYVPQGDARLPLKWMSPESIFDKVFTTQSDVWSYGVLLW
EIFSLGASPYPGLNIDEEFCHQLKEGTRMRPPEYSTPEIYSTMLACWEANPSDRPTFTGL
VETLGDLLEARVQQDGKDYIPLGTFLCGERDPDSSVQRDSTDSSLTDLHPHRLISLGYMN
TRSTAKLRTFEELPSKDPPGPDDEQGDSGMVLPSEELKRLKWTSGAKSLTRFFTISTCRE
NLVXCMCNDITGLHDEPPVLPCDCDSEESCSPPPDYNSAFLYPSL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccgtgttaggttgaaggatgggaaggtggcagctgaggagtgttcccgttac
catgtggacgggaattccctggtgatccgggatgtggcgaaggaggacgcagggaagtac
actatcctggtgggaatccaagaacacagactctaccagaacctaacgctctctcttgtg
gtcaacgtgagtcctgggataggggagaaggcagtgtcagtgcaggacccaggcagtgtt
ccgcggggtagcagacaagccctgcactgcacctcccacggagtcccccctcctcacatc
acatggctctggcacccctgcccccccaaaggcctgtgtgtgtgtcctccgtcctcctca
atgtggagccccgtaaaagagagggcccccggcacttccacagacaaccacatcctgagt
gtcacacacagacaggaagtcctccaggggaagaataagaccgtgggggttttgatggtt
gctgaggcgtttgtgtccggcgtgtatcgctgtattgcctctagttctgtgggaaaggat
gagctggacatgcccttctatgtaacagacgtcccaggaggcttcagtgtgagtcaggag
gatgagccaagggagggaggagacctacacctcacctgcgtagccaataagcacctgtac
accaatttttcatggcaacgggtgactgacccagcagaggccacacccctgaccccctcc
ctgggtggtgaactgacctcaggagagttttctgacactctgagtctattgcttagcaac
ctgacggcgggggattctggaacctaccgctgctccgcccatcacctgctgacgggacag
aacacacatctggacacacaggtggacgtcacagtactggaggctccggtgctgttacag
aatctctctgactgcagcgtgaacatcagcagctcagtgacactcagctgccacgcccac
ggagtgccacgcccattcatcacatggtacaaggaccaacacacactgcttcagggatca
ggtatcgtcatagcacaaggaggcgagaacctccacattgaccgaatcacagtggaggac
cagggtctgtacacctgccaggcaaccaatgagagaggctctgctgagagctccgcctac
atctgggttcacaactcatcaggtggcctgtctctggagattcctactctcacctgtacc
tgcctggtggccactctcttctggctgcttctcactctcttcatacgtaaactcaaaaag
ccaaactcttcgagtgccaaggctgagtacctttcaatcatcctggacccaggggagggg
cctctggaggagcagtgtgataggctacagtacgacccaggccaatgggagttccccaga
gaccgcctcaaactggagaaacctctgggccgtggggcctttgggaaagtcatgcaggcg
tctgcctttggcatcgacaactctacaggctgcaggactgtggctgtcaagatgctcaag
gagggggctactcccagtgaccacaaggctctgatgacagaactgaaagtcctgaaccac
atcggccaccacctgaatgtggtcaacctgctgggagcctgcaccaaggcagggcctctc
atggtgatagtggagtactgtaggtatggaaacctatccacctacctgagaggcaagaga
gagacgtgttcctgctcacaaggatctcatctcctacagtttccaaggttctcgagcatg
aggttcctcgcctctcgcaagtgtatccaccgtgacctggctgccaggaacattctgctg
tctgaagacaaagtggtgaagatctgtggactttggtctgccagagacctctacaaagac
ctcgactacgtcccgcagggagacgcaaggctgccattgaagtggatgtccccagagtcc
atctttgacaaggtgttcacgacccagagtgacgtgtggtcctatggagttctgctctgg
gagatattctctctgggagcctctccgtacccaggcctgaacatagatgaggagttctgc
caccaactaaaggagggaacacgcatgcgacccccagagtacagcactccagaaatttac
agcaccatgctggcatgctgggaggctaacccctcagaccgccccaccttcactggccta
gtggaaacactgggagacctgctggaggcacgggttcaacaggatgggaaggactacatt
cccctgggcacgttcctgtgtggagagagagacccagacagcagcgtccagagagactcc
acagacagctccctgactgacctgcatccacacagactcatcagtctaggctacatgaac
accaggagcacagcgaaactcaggacctttgaggaactgcccagcaaggacccgcctggg
ccggacgatgagcagggagacagcgggatggttctaccctctgaggaactcaaacgcctc
aaatggaccagcggtgccaagagcctcacaaggttcttcaccatcagtacgtgcagggaa
aacctggtgcsctgcatgtgtaatgacatcactggtctccatgacgagccgcctgtcctc
ccatgcgactgtgactccgaggagagctgttcccctccacccgactacaactctgccttc
ctctacccctccctctga
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