Salvelinus sp. IW2-2015 (Arctic char): 111954712
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Entry
111954712 CDS
T05762
Name
(RefSeq) major histocompatibility complex class I-related gene protein
KO
K06751
MHC class I antigen
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
salp04145
Phagosome
salp04218
Cellular senescence
salp04514
Cell adhesion molecules
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111954712
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111954712
04145 Phagosome
111954712
09143 Cell growth and death
04218 Cellular senescence
111954712
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111954712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111954712
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
111954712
Exosome [BR:
salp04147
]
Exosomal proteins
Proteins found in most exosomes
111954712
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
salp00537
]
Antigens
111954712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Psg1
Ig_3
ig
Ig_2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
111954712
NCBI-ProteinID:
XP_023830369
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Position
LG30:complement(18033963..18036876)
Genome browser
AA seq
375 aa
AA seq
DB search
MISFCLLFLWIPITSAAPHSMKYLYTAVSGDTDFPEFTVVGLLDDHQFVYFNSNTKTLVL
TTEWMKKKAGKYYRKLYTEPLINQHEGFKNLITFAKKQFNQTQSKGVHTIHNLYGCEWND
ETELKDYFHHYGYDGEDFISLDMKTVRWITFVQQADTIKQKWDDNSKDLHYLKWYFTKEC
IDTLKKYLNFASSVLKRIVPPSVSLLQKTPSSPVTCHATGFYPSGVTVSWQKDGQEQHED
VLHGEILPNDDXTFQKSAHLTMDCDEWKNNNYTCVVEHKENIIAIRLDQSVIKTNSDKPP
ESGPIIIGVVVAVILLALITIAGFIMWNRKRTVSDDGFNPSMTQQNQIQLEVSLSLIKQE
RSRENRTFIEGGEAS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatttccttctgtctcttgtttctctggattcctataacttctgcagctccccactct
atgaaatacttatacactgcagtctcaggtgatactgacttcccagagttcacggtggtg
ggtttgctggacgatcatcagtttgtgtactttaacagcaacaccaagacactggtcctc
accactgagtggatgaagaagaaggcaggaaaatactacaggaaactctacactgagccc
ctgattaaccaacatgaaggtttcaaaaacctcattacgtttgcaaagaagcagtttaac
caaacccagtcaaaaggtgttcacacaatccataacttgtacggctgtgagtggaatgat
gagactgaactcaaagattatttccatcactatggatacgatggtgaggatttcatttca
ttggacatgaagaccgtaagatggataaccttcgtacagcaggcagataccatcaaacag
aagtgggacgacaacagcaaggatctgcactatctcaaatggtacttcactaaggagtgt
attgacactttgaagaagtatttgaacttcgccagcagcgtcttgaagcggatagtccct
ccatcagtgtctctgctccagaagaccccctcctctccagtgacctgccacgctacaggt
ttctaccccagtggagtcacggtgtcctggcagaaagatggacaagaacagcatgaagat
gtgttgcayggagagattctccccaacgatgatrgaaccttccagaaaagtgctcacctc
acaatggactgtgatgaatggaagaacaacaactacacctgtgtggttgaacacaaagag
aacatcatcgccatcagactggatcagtctgtgataaaaacaaacagtgacaagcctcct
gaatctggccccatcattattggagtagtggtagctgtcatcctcctagccctcatcacc
atagctgggtttattatgtggaacaggaagaggacagtctctgatgatggtttcaacccc
tccatgacacagcagaaccagatacaacttgaagtttctctctcactaatcaaacaggag
agaagcagagaaaataggacctttattgaaggaggtgaggccagctga
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