Salvelinus sp. IW2-2015 (Arctic char): 111955132
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Entry
111955132 CDS
T05762
Name
(RefSeq) exostosin-1b-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
salp01100
Metabolic pathways
Module
salp_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
111955132
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111955132
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
111955132
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
111955132
Glycosyltransferases [BR:
salp01003
]
Glycan extension
O-Glycan
111955132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
111955132
NCBI-ProteinID:
XP_023830998
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Position
LG30:22278958..22377122
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AA seq
740 aa
AA seq
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MQAKKRYLILLSAGTCLSLLFYFGGVQLPSSGRNRHDRSHNGYRPDQPWPHFSEPLQQFL
LWDQPDTEEYNIHISPRQKREVNTSVYKGKRCRMDSCFDFSACKKNDFKVYVYPQQKGEK
ISESYQNILSIVEGSRFYTTDPGQACLFILSLDTLDRDSLSPQYVHNLKTKVQNLHLWNN
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTEXFRPNFDVSIPLFSKEHPRTGG
DRGYLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALYHVHNQEDVVLLTTCKHGKDWQK
HKDARCEKDNAEYDKYDYREMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIINWNTAAVIGDERLLLQIPSTVRSIHQDKILALRQQTQFLWEAYFSSVEKIVLTT
LEIIQDRVLQQESRSTLMWNSHPGGLFALPQYSAHLGDFPFYYATLGIKPHPKFTAVIHA
VTPLVSQSQPILKLLVSVAKSQYCAQIIVLWNCDKPLPAKHRWPATSVPVIVIEGENKVM
SSRFLPYETIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERLVGYPARSHFWDSNKERW
GYTSKWTNDYSMVLTGAAIYHRYYHFLYTNFLPASLKGMVDQLANCEDILMNFLVSAVTK
LPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGGMPLVHSQMRLDP
VLFKDQVSILRKKYRDIERL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgatatttaatcctgctctccgccggtacatgtctaagtctactg
ttctactttggaggtgtacaacttccatcttcgggcagaaaccggcatgaccgtagccac
aatggatatcgccccgaccagccgtggccacacttctcggaacctttacaacaattccta
ctctgggatcaaccggacaccgaggaatacaacattcacatatcgccaaggcagaagagg
gaagttaatacaagtgtgtacaaaggcaaaagatgtcgcatggattcgtgctttgatttc
tcagcatgcaaaaagaacgatttcaaagtgtatgtctacccccagcagaaaggggagaaa
atctcagaaagttaccagaatattttgtcgattgttgagggatccaggttctacaccact
gacccgggtcaagcttgtytattcatcctgagcttggacaccctggaccgggactcgctg
tctccgcagtacgtgcacaatctcaaaaccaaggtccagaaccttcatctctggaacaac
ggcagaaaccacctcatatttaacttgtactctgggacatggccggactacacggaagac
ctrggtttcgacataggccaggccatgttggccaaggccagcatcagtaccgagawyttc
aggcccaactttgacgtgtccatcccgctgttctccaaggagcaccctaggaccggaggg
gacagggggtacctaaagtacaactccatcccacctttcaggaaatacatgcttgtgttt
aaggggaagcgataccttacagggatagggtcagacacgaggaatgccttatatcaygtc
cataaccaggaggatgtggtgctcctcaccacctgcaaacacggaaaggattggcagaaa
cacaaggacgcacgctgtgaaaaggacaacgcggaatatgacaaatatgactacagagag
atgctgcacaactccactttctgcctggtgcctcggggcaggcgcctgggatcctttcgc
ttcctagaggcgctgcaagcagcctgtgtgcctgtgatgctgagtaacggctgggagctg
cccttctctgagatcatcaactggaacacggcggccgtcatcggggacgagaggctcctg
ctgcagatcccgtccacggtgcgctccatccatcaggataagatcctagctctgaggcag
cagacccagttcctgtgggaggcctacttctcctctgtggagaagattgtgctgaccact
ctggagatcatccaggaccgggtgctgcagcaggagtccaggagcaccttgatgtggaac
agccaccccggggggctcttcgccctgccacagtactctgcccacctgggagacttcccc
ttctactacgccaccctaggaataaaaccgcatcccaagttcacggcagtcatccatgca
gtcacccccctggtctcccaatcccagcccatcctcaagctgctggtgtctgttgccaaa
tcacagtactgtgcacagatcattgtgctgtggaactgtgacaagcctctccctgctaag
caccgctggcctgccacctccgtgcccgtcattgtcatcgagggagaaaataaggtgatg
agcagtcgcttcctgccctacgagaccattgtcaccgacgctgtgctcagtctggatgag
gatacggtgctctcgaccacagaggtggactttgccttcacggtgtggcagagcttccca
gagaggttggtgggctacccggcccggagccacttctgggacagcaacaaggagcgctgg
ggctacacttccaagtggaccaacgactactccatggtgctgaccggagctgccatctac
cacagatattaccacttcctttacacaaacttcctgcctgccagcctgaagggcatggtg
gaccagctggccaactgcgaggacatcctcatgaacttcctggtgtcagccgtcaccaag
ctgccgcccatcaaggtcacccagaagaagcagtacaaagagaccatgatgggacagtcg
tcgcgggcctcgcgctgggccgacccggaccacttcgcccagcggcagacgtgcatgaac
aagttcgccagctggtttggcggcatgcccctggtccactcccaaatgaggctggacccg
gtgctgttcaaggaccaggtctccatcctgcgcaagaaatacagggacatcgagaggctc
tga
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