Salvelinus sp. IW2-2015 (Arctic char): 111955294
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Entry
111955294 CDS
T05762
Name
(RefSeq) exostosin-1c isoform X1
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
salp01100
Metabolic pathways
Module
salp_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
111955294
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111955294
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
111955294
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
111955294
Glycosyltransferases [BR:
salp01003
]
Glycan extension
O-Glycan
111955294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
111955294
NCBI-ProteinID:
XP_023831243
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Position
LG30:complement(21587818..21689600)
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AA seq
759 aa
AA seq
DB search
MQARKKYVLLGLCACCWLLLFYWGGGVQVRLLKLLGQQRGDVVRPWPDWTDRVLLPGYAQ
LEELQTGPGSAESPRQRHQAWTGIYKDSRCRMETCFDFTRCRRRGRDGFRVYVYPSEKGE
RGSESYRKILTSIGESRYYTTDPREACLFVLGIDTLDRDQLSGQFVPNLDDRIKGYPLWN
EGRNHLIFNLYSGTWPNYTEDLGFNIGQAILAKASLNTEHFRPGFDVSIPLFSKDHPQKG
GERGWLVRNTVPPRRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIVSLTTCRHGKDWE
KHKDARCDHDNLEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPVLLSNGWE
LPFSDVIQWNQAVIEGDERLLLQVPSTVHAVGNERVLALRQRTQMLWDAYFSSVDKIVLT
TLEIIKDRVFSHVSRNKYMWNSLPGGLLVLPEYSTHLAHFPFYYLSLGVSPGQEFTAIIH
AVSPLVSQSQPIMKLLQVVSKSKYCSQIIILWNSEKPPPHRSKWPPMPVPLTVTDGRRKT
SSRFLPNVAIETEAVLSLDEDTVLLTSEVNFAFLVWVSFPERIVGYPPRSHFWDPVKNAW
GYTSKWTNEYSIVLTGAAFYHRYYHYLFSHYLPPSLRALVDRTSNCEDILMNFLVSAVTH
LPPIKVAQRKQYKELPSPQVRPHPSTVNLTNELPSXQGTKMSAPWANPEHFTQRQECVNS
FASWFGYMPLVHSQFRLDPLLFKDQVSVLRKRYKDLERA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcgtaagaagtatgtcctgctggggctgtgtgcttgctgctggctgctgctc
ttctactggggcggtggggtccaggtccgtctcctcaagctgctggggcagcagaggggc
gatgtggtgcgcccctggcccgactggaccgacagggtactccttccgggctatgcccag
ctggaggaactccagacggggcctggttctgccgagtccccccgccagcgtcaccaagcc
tggacgggcatctataaagacagtcgctgccgaatggagacctgcttcgactttacgaga
tgtcgacgtagagggcgggacgggtttagagtgtacgtttacccgtcggagaagggtgag
cgcgggtcggagagctatcgtaagatactgacgtctataggcgagtcgcggtactacacc
acggaccctcgcgaggcatgtctcttcgttttggggattgacactctggaccgcgaccag
ctctcggggcagttcgtgcccaacttggacgatcgtatcaagggttacccgctctggaac
gagggacggaaccacctaatctttaacctgtactcgggcacctggcccaactacaccgag
gacctgggcttcaacatcggtcaggccatcctggctaaagccagcctcaacacggaacac
ttccggcccgggttcgacgtctccatccccctcttctccaaggaccacccccagaagggg
ggcgagaggggctggttggtgcgaaacacggtgccaccgcgcaggaagtacctgttgatg
ttcaaagggaagcggtatctaacgggcatcggctcggacacccgtaacgccctgcatcat
atccataacgggaaggacatagtgtccctcaccacatgccgtcacgggaaggactgggag
aaacacaaagacgcccgctgtgaccatgacaacctagagtatgagaggtttgattaccag
gagctgctccacaactctaccttctgcctggttccccgggggcgtcgcctgggctccttt
cgcttcctagagtctctacaggcggcgtgtattcctgtgttgctcagtaatggttgggag
ctgcccttctctgatgtcatccagtggaaccaggctgtcatcgaaggagatgagagactg
ctactgcaggtcccgtctacagtgcatgcggtgggaaatgagcgagtcctagctctgagg
cagcggacccagatgctatgggatgcctacttctcctccgtggacaagatagtcctcacc
acactggagataattaaggaccgggttttctctcacgtctccagaaataagtacatgtgg
aactccctgccagggggcctactggtcctgccagagtactccactcacctggcccacttc
cccttctattacctgagcctaggggtcagtccaggtcaagagttcaccgccatcatccat
gccgtctccccattggtctcccagtctcagccaatcatgaagctgcttcaggtggtctcc
aagtccaaatactgttcacagatcatcatcctgtggaacagtgagaaaccaccgccccac
cggagtaaatggccccccatgcctgtccccctcactgtgacagacggtaggaggaagacg
agcagtcgtttcctgcccaacgtggccatagagacagaggcagtgctgagtctggatgaa
gatacagtcctgctgaccagtgaggtgaactttgccttcttggtgtgggtgagttttcct
gagcgcatcgtgggctaccctcccaggagtcacttctgggacccagtgaagaatgcgtgg
gggtacacctccaagtggactaacgagtactccatcgttctgacaggagcagccttctac
cacaggtactatcactacctgttctcccactacctgcccccttccctgcgggcactggtg
gaccgcacctccaactgtgaggacatcctcatgaacttcctkgtttccgccgtcacccac
ctgccgccaatcaaagtggcccagaggaaacagtacaaggagcttcccagcccacaggtg
aggccccacccatcaacggtgaatctgaccaatgagctgcccagcmcacagggtacgaag
atgagtgctccgtgggccaacccagagcactttacccagaggcaggagtgtgtgaacagc
ttcgccagctggttcggatacatgcccctggtccactcccagttccgtctggaccccctg
ctcttcaaggaccaggtgtctgtcctgcgcaagaggtacaaggacctggaacgtgcctga
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