Salvelinus sp. IW2-2015 (Arctic char): 111955886
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Entry
111955886 CDS
T05762
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
KO
K09290
tropomyosin 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04260
Cardiac muscle contraction
salp04261
Adrenergic signaling in cardiomyocytes
salp04814
Motor proteins
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111955886
04820 Cytoskeleton in muscle cells
111955886
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
111955886
04261 Adrenergic signaling in cardiomyocytes
111955886
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111955886
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
111955886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
DUF3450
CENP-F_leu_zip
Lebercilin
DUF745
TMF_DNA_bd
PUMA_CC
XhlA
ATG16
SlyX
Crescentin
DUF16
Motif
Other DBs
NCBI-GeneID:
111955886
NCBI-ProteinID:
XP_023832006
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Position
LG31:14300676..14332225
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AA seq
284 aa
AA seq
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MEAVKKKMLMLKLDKENALDAAEQADTDKKAAEERSKQHEDELLQMQKKLKGTEDELDKY
SEALKDAQEKLEVADKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLLIIEGDHERTE
ERAELAEAKCAELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagtcaagaagaagatgcttatgttgaagctggataaggagaacgctctggac
gcggcagaacaggccgataccgacaagaaggcagccgaggagaggagcaagcagcatgag
gatgagttgctgcagatgcagaagaagctgaaggggactgaggatgaactggacaaatac
tctgaggccttgaaggatgcccaggagaagttggaggttgcggacaagaaggccgcagat
gctgaggctgaggttgcttccctgaaccggcgtatccagctggttgaggaggagttggac
agggcccaggagcgactggccactgctctgcagaaactggaagaggcagagaaggctgcg
gatgaaagtgagaggggcatgaaggtgattgagaaccgagccctgaaggatgaggagaag
atggagctacaggagatccagctgaaagaggccaagcacattgctgaggaggctgatcgc
aagtacgaggaggtggctcgtaagctgctgatcatcgagggggatcacgagcgcacagag
gagagggcagagcttgctgaggctaaatgtgctgaactggaggaggagctgaaaaacgtc
accaataaccttaagtccctggaggcccaggcggagaagtactcccagaaggaggacaag
tatgaggaagagattaagatcctgactgacaagctcaaagaggctgagactcgtgctgag
tttgctgagaggtctgtggccaagctggaaaagaccatcgatgatctggaagatgagcta
tacgcacagaaactgaagtataaggccattagtgaggagttggaccacgccctcaatgac
atgacttccatataa
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