Salvelinus sp. IW2-2015 (Arctic char): 111956640
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Entry
111956640 CDS
T05762
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
111956640
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111956640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111956640
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
111956640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
C2-set_2
ig
He_PIG
Neur_chan_memb
Protocadherin
TMEM154
V-set_CD47
DUF6377
RIFIN
DUF6249
DAG1
EphA2_TM
Miga
Stevor
Vpu
Motif
Other DBs
NCBI-GeneID:
111956640
NCBI-ProteinID:
XP_023832926
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Position
LG32:complement(31510542..31523004)
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AA seq
598 aa
AA seq
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MELPVWGQSQWGTAWLVLWAFAVCVRGGFVEPPPSFSLRSLTEDETRLPCQFQVQEEEQV
VQVSWFKELPDGTKEQIITAHLTEGHTEFGRYSGRVRFESSSPTVDSALLIMNTEESYEG
KYTCHISTFPYGNFERQLSLTVWTLPISSLDPVVLEEGQSFRVAASCRSVARPPPRLTWD
TDLPGQNQNRSSEGGAVSTHFSLHPLRSMNGMRLDCLVWHPALEQPRRISNRLVVQFPPD
AAVTGYNGNWYMGLKGAELKCETGGNPKPQSFTWTRGGKALPDGLTVNGARLLFGRALRQ
NDTGVYECVVNNGIGTRKVESNITVTEKIRSVQETTVDTLVMVIIVVAAGVLVIVMIIII
ILVNQYHRRKNRKLEMELSERTLKINTLSRQDSSRRLNSVSTDPRGQNEDCTLLRLDSRM
KNSLMSLEDRPIYIGSESSLGGRRGTVGEGDVDYLGRPVLYQSSWHEGRESMRGAEMEGE
REERRRRVESYLKRSNMSLDSGLPSSLVPIKPQDQDGSVGPTDITPMLSDLCGQREVVTK
GEDWGHRQAVLEVDEADCDTSSYQISEALSNHFHYSNGFLRPKPHSNAILLHPRGQII
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggagttacctgtctggggccagagccagtggggcacagcgtggttggtgctatgggca
tttgcagtgtgtgtgaggggtgggtttgtggagcctcctccatccttctccctgcgttcc
ttgacggaggatgagacgcggctgccctgccagtttcaagttcaggaggaggagcaggta
gttcaggtcagctggttcaaggagctacctgatggcaccaaggaacaaatcatcactgcc
cacctcacagagggacacacagagtttgggcggtactctgggagagtgaggtttgagagc
agtagccccacagtggactctgccctgctcatcatgaacacggaggagtcttatgagggg
aaatacacctgtcacatcagcacattcccctatggaaactttgagaggcagctgtcactc
actgtgtggaccctaccaatctcctctctggacccggtggttctggaggagggccagtcc
ttccgcgtagctgcttcctgccgctccgtggcccgtcctccacctcgactgacctgggat
acggatctccctggtcagaaccagaaccgcagctccgagggcggggccgtgtccacccac
ttctccctgcaccccctgaggagtatgaatggcatgcggctggactgcctcgtctggcac
cctgctctggagcaaccccggaggatcagtaaccgcctggtggtgcaatttcccccagat
gcagctgtcactggctataatggaaactggtacatgggactgaagggagctgaactcaag
tgtgagactggaggaaaccccaaaccacagagcttcacctggaccaggggtggtaaggcc
ctgccagacggcctcactgtgaatggagcaaggcttctgtttggccgagccctgagacag
aatgacactggagtttatgaatgtgtggtgaacaacggcattgggacaaggaaagtagaa
tcgaacatcacagtgacagagaaaattcgcagtgtgcaggaaaccactgttgacactcta
gtgatggtaattatagttgtggctgctggggttttggtcatcgtcatgatcatcatcatc
atcttagtcaaccaataccacaggcgcaaaaacagaaaattagagatggagcttagcgaa
agaacgttaaaaatcaacacactctccagacaggactcctcccggagactcaactctgtc
agcacagaccccagaggacagaatgaagactgtacactactcagactagacagtagaatg
aaaaacagcctaatgtcccttgaggaccgtcccatctacataggcagtgaatcatccctg
ggtgggaggcgggggactgttggagagggggatgtggactacctaggccgccctgtcctg
taccagtctagctggcatgagggcagagagagtatgaggggcgctgagatggagggagag
agggaagagcgcagacgaagggtggagtcgtacctgaagagaagcaatatgtccctggac
tctggccttccttcctcccttgtccccatcaagccccaggaccaggatggcagtgtgggg
cccacagacatcaccccaatgctcagtgacctgtgtggccagagggaggtggtgaccaaa
ggggaagactggggccatagacaggccgtgctggaggttgatgaggcagactgtgatacc
agttcttaccagatctcagaggcgctctccaaccacttccactacagcaacgggttcctg
cggcccaaaccacactccaacgccatcctcctacaccccagaggacagatcatctag
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