Salvelinus sp. IW2-2015 (Arctic char): 111958865
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Entry
111958865 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
111958865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111958865
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
111958865
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
111958865
NCBI-ProteinID:
XP_023835954
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Position
LG35:complement(398414..405350)
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AA seq
827 aa
AA seq
DB search
MRKTFMDKSWILYLKESMDAGDDQNTGSTNGNAPSAGNSRPPQIAHMSLYERQAVQALQA
LQRQPNAAQYFQQLMLQQQINSAQQLHNLAAVQQATLAASRQSNSPNHSVSQATTTVNLS
TTSGGGIMSNPRLLGPATSVTSSALSQSVLLGGNSAGQGQMYLRVNRSLRAPLAASQLIF
MPGGTATAAVATVAQQQPQQQQQQQEVHPTSNAQSDNDQVQNLALHCISTPRVAAVKTEF
PDRRDAANYSFSQQQQQHPQQQQQQFSQNTQQQIQPQQQQQQMANKLTSYTHPTALPSIN
VKTGNQLNMAPTAATSVPASSPTLPLSQLLLSPSGLCQARAVTTVTPAATVTHILVPTSN
VPTSSQGYPIGSVAPKTNVNTQTLVVQPLQQSNTNTDKVSHSSGPVHIQPKTSQGHRLPV
QLPPRHPPPILPAPPNTGGHHPPHVPVQLVGARQGSVGNSQALAQARSCCPQDKSIAIAS
TGGNTTAKPAIGSLKRKSETDATNEMAVEPSQICCPPMRDSAPLCPAPMLDSAPKAVPAF
SSPPNLSWGVGGQGDRAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPVKEPLAMSVQ
QADNGGPAVLKCEYCESLAPASQFRGSKRFCSKTCAKRXNVSCSHHFQVSRGRASARPPG
PPVPPDSIVRRRGPRRSSSEIACAKIAGRHLPVKECRSESSRSEDVSSCDGEEEEEEEDS
PSLSPSSSLSCPRPAHCDPHLDDSAQGSLPLDEANFLSGSPAHWGVEEVCRFISSLQGCE
ELAAQFLSQEIDGQALLLLREEHLISTMNIKLGPALKICAFINSLRD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaacgtttatggataaaagctggattttatatttaaaagagagcatggatgca
ggtgatgaccagaacacgggctctaccaatgggaatgctccgtctgctgggaactcccgc
cctccccagatagcccacatgtctctgtatgagaggcaagctgtgcaggcccttcaggcg
ctgcagagacagccgaacgcagcccagtacttccagcagctcatgctgcagcagcaaatc
aacagtgcccagcagcttcacaacctggctgccgtgcaacaggccacacttgctgctagt
cgccagtccaactctcccaaccacagtgtctcccaagcaaccaccactgtcaatctgagc
accacctctgggggagggatcatgagcaatccccgcctactcggccctgccacatcagtg
acatcatcagctctcagccaatcagtgctgctgggtgggaactcagccggacagggccag
atgtacctgagagtcaaccgctccctcagggcacccctcgcagcctcccagctcatcttc
atgcctggtggcacagcaacggctgctgtagcgacagttgcacagcaacagcctcagcaa
caacagcagcaacaggaagtccatcccacctccaatgcccaatccgacaatgaccaggtg
caaaacctggctctccactgtatctccactcccagagtggccgcagtgaagacggagttt
ccagacaggagagacgcagccaactattcttttagtcaacaacaacaacagcatcctcag
cagcaacagcagcagttctctcagaacacccagcagcagatacaaccccagcagcaacag
caacaaatggccaacaaactgactagctacactcatcccactgctctccccagtataaat
gtcaagactggaaaccagctgaatatggccccaaccgctgccacctcagttcccgcctcc
tctcccacgctccctctctcccagctcctcctctccccctcaggcctttgtcaggcccgg
gcggtaaccacggttacccctgctgctacggtaacgcacatcctagtccccacctccaac
gttcctacttcctcccagggctaccccataggttcagtcgcccccaaaactaacgtcaac
acccagaccttggtggtgcagccactgcagcagtccaacactaacacggacaaggtgagc
cacagctctggccctgtgcacatacagcccaaaacctcacagggtcaccgcttacctgtc
cagctgcccccacgccaccctccacctatcctcccggctccgcccaacacggggggccat
cacccgccccatgtcccagtccagctggtgggagctaggcagggctcagtaggaaactcc
caggctttggcacaggcccgaagctgctgcccccaggacaaaagcatcgctatagcctct
actggagggaacaccacggcaaagcctgcaattggctcattgaagaggaagtcggaaact
gatgcaaccaatgagatggcagtcgaaccttcccaaatttgctgtccaccaatgagagat
tctgcccctctatgtcccgcccccatgttggactcagctcctaaagcggtgccagccttc
tcctctccccccaacctgtcttggggggtggggggtcagggagacagagcccctctgccc
caggcggtggtcaaacctcaggtcctcacccacctcatagagggttttgtcatccaggag
ggagctgagcctttccctgtgactgggccagtgaaggagcctctagccatgagtgttcaa
caggctgacaatggaggccctgcagtgttgaagtgtgagtactgtgagagcttggctcca
gctagccagttcaggggctccaagaggttctgctccaagacctgcgctaagagataraat
gtgagctgcagtcaccacttccaggtcagtagggggcgagcttctgcacggccgcctggt
cctcccgttcccccagacagcatcgtcagacgcaggggtcctcgcaggagtagctcggag
atcgcctgcgctaaaatagccggcagacatttgcctgtcaaggagtgtcgttctgagtcc
agtcgctcggaggatgtgtccagctgtgacggagaggaggaggaggaggaagaagattcc
ccatcactctcccctagctcctccctctcctgccctaggcccgcccactgcgatccccat
ttggacgactcggctcaaggcagcctcccattggacgaggccaacttcctgtctgggagc
cccgcccattggggtgtggaggaggtctgcaggttcatctcttcactacaaggttgtgag
gagctggctgcccagttcctgtcccaggagattgacggacaggccctgctgctactcaga
gaagaacacctcatctccaccatgaacatcaaactaggacccgcccttaagatctgtgcc
ttcatcaacagcctacgagactga
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