Salvelinus sp. IW2-2015 (Arctic char): 111959078
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Entry
111959078 CDS
T05762
Name
(RefSeq) beta-1,4-galactosyltransferase 3
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00510
N-Glycan biosynthesis
salp00513
Various types of N-glycan biosynthesis
salp00514
Other types of O-glycan biosynthesis
salp00515
Mannose type O-glycan biosynthesis
salp00533
Glycosaminoglycan biosynthesis - keratan sulfate
salp00601
Glycosphingolipid biosynthesis - lacto and neolacto series
salp01100
Metabolic pathways
Module
salp_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
salp_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
111959078
00513 Various types of N-glycan biosynthesis
111959078
00515 Mannose type O-glycan biosynthesis
111959078
00514 Other types of O-glycan biosynthesis
111959078
00533 Glycosaminoglycan biosynthesis - keratan sulfate
111959078
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
111959078
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111959078
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
111959078
2.4.1.90 N-acetyllactosamine synthase
111959078
Glycosyltransferases [BR:
salp01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
111959078
Glycolipid
111959078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
111959078
NCBI-ProteinID:
XP_023836275
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All DBs
Position
LG35:11222031..11252325
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AA seq
399 aa
AA seq
DB search
MATWLQSKWRYLFMFLGVQLVVMALLSREGYHKRVSYFIRIFRKPETTASGTSGASSPHV
RNHTGSDVYANLSLLAKAHGRGEYMPYCPKTSPLIGGPIHVSFPSGLTLAQVARKNPLVV
LGGRYRPPDCEARHRTAIIIPHRNREHHLKFLLYYLHPFLQRQQLNYGIYVIHQAGNYTF
NRAKLMNVGFREAMREEDWDCLFFHDVDLIPEDDRNTYMCDANPKHAAIAMDKFGYKLPY
KMYFGGVSALSPLHYLKMNGFPNNYWGWGGEDDDIGVRVSLGGMFISRPSVKVGRYKMIK
HKLDKGNDVNPRRFNMLAKTRQTWKLDGMNTVDYEVLSRDHFPLYTNITVHIGTEAGLHA
TAPSPKIPVKAPAKPPVEAPTKPPAKLQQEQKQNQPTNH
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtggctacagtcaaaatggcgctacctgttcatgttcctgggtgtccagctg
gttgtcatggctctgctgtcccgcgagggctaccacaagcgagtgtcgtacttcatcagg
attttccgcaagccggagaccactgcgtcggggacgtccggtgccagctcgccccacgtg
cgcaatcacacgggcagtgacgtctacgccaacttgtccctcctggccaaggcccacggc
cggggcgagtacatgccctactgccccaagacgtctcccctgataggtggaccgatccac
gtcagctttccttctgggttgacactggcccaagttgcgcggaagaatccattggtggtc
ctcggggggcgctacagaccgcctgactgtgaggcacggcaccgcaccgccataatcatt
ccccacagaaaccgggagcaccacctgaagttcctcctctactaccttcacccattctta
cagcgacagcagctcaactacggcatctacgtcatccaccaggctggtaactacacgttt
aaccgggccaagctaatgaacgttgggttccgggaggccatgcgggaggaggactgggac
tgcctgttcttccatgatgtggacctcatccctgaggacgaccgcaacacctacatgtgc
gatgccaaccccaagcatgccgccatcgccatggacaagtttggatataagctgccatac
aagatgtatttcggaggggtgtcagcgttgtctccactgcactacctgaagatgaacggc
ttccccaacaactactggggctggggaggagaggacgatgacattggagtcagagtatcc
ctaggagggatgttcatctctcgtccatcggtgaaggtgggccgatacaagatgatcaaa
cacaagctggacaagggaaacgatgtgaaccccaggaggttcaacatgctggccaagacg
cgtcagacgtggaagctggacggcatgaacactgtggactacgaggtgctgtcacgtgac
cacttccccctctacaccaacatcactgtgcacatcggcaccgaggccggcctgcatgcc
acggcgccgtcccccaagatccctgtcaaagccccagcaaagccgccagtcgaagccccc
accaaacctccagccaagctccaacaggaacaaaaacagaaccaacccacgaaccactga
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