Salvelinus sp. IW2-2015 (Arctic char): 111959839
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Entry
111959839 CDS
T05762
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04081
Hormone signaling
salp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
111959839
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
111959839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111959839
Membrane trafficking [BR:
salp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
111959839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
RA_2
RA
Vit_b-sht_shell
Motif
Other DBs
NCBI-GeneID:
111959839
NCBI-ProteinID:
XP_023837416
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Position
LG36:12021056..12075169
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AA seq
874 aa
AA seq
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MAGLLAPPYGVMESGGRSTDRMSDKENISNNSFGSISKHLNKKSLIESPAKLRPKSISQV
PSEKILRAGKVLRDAILSRAPHMIRDRKYHLKTYRQCCVGTELVDWQMQQSSSVYSRIQA
VGMWQVLLEEGVLNHVDQELTFQDKYLFYRFLEDEQEDAPLPTEEETRESDEELQDTLLL
LSQVGPDAHMRMILRKHPEQRAADDLEIIYEELLHIKALSHLSTTVKKELAGVLIFESHA
KAGTVLFNQGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVL
REDNCHFLRVDKEDFNRILRDVEANTVRLKEHDQDVLVLEKSPSSIQTSTHGTTTTPSHY
KYTVMSGAPEKILEHFLEMMRLDSHLNESDPALDDFVLMHCVFIPNSQLCPVLMAHYHAE
ASQGSEQERLDYTLNNKRRVIRLVLQWASVHGDHLQEEDASLAFLEEFFVSVSDDATKIP
ALKDQLPELEKLVKNSSDDARSSPQKHKVLLRQFSMGDEKLQKRQAIKSNDEILFKVYCS
DHTYTTIRVTVAASVREVISAVADKLGSAEDLLLVNLSSAGDKVVLKPNDISVFSTLSVN
GRLFVCPRDQLDSLTPLPEQEGPSTGSMGSFELMSSKDLAYQMTVYDWELFHCVHEHELI
YHTFGRQNFKKTTANMDLFLRRFNEIQLWVITEICLCAQLSKRVQMLKKFIKIAAHCKEY
KNLNSFFAIIMGMSNPAVSRLSQTWEKLPSKFKKFYSEFESLMDPSRNHRAYRLTVAKLD
PPIIPFMPLLIKDMTFTHDGNKTFIDSLVNFEKMRMIANTVRIVRYCRSLPFSAEPSQTS
KNHPDVRSYVRQLTVIDNQRTLSHLSHRLEPRRT
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctggactgcttgccccaccctatggagttatggaaagtggtggacgtagcactgac
agaatgtctgacaaagagaacataagcaacaactcttttggatccatctctaaacatctg
aataagaagtcattaattgaaagcccagccaaactccgtcctaaatccatttctcaggtc
ccatctgagaagatcctgcgagcagggaaggttctccgtgatgccatcctctccagagct
ccccacatgatccgagacaggaagtaccacctgaagacatacaggcaatgctgtgtggga
acagagctggtggactggcagatgcagcagagctcctctgtttactctcgtattcaagca
gtgggcatgtggcaggtgctgttagaggaaggtgttctcaaccacgtggaccaggagctg
accttccaggacaagtatcttttctaccgtttcctggaggatgaacaggaagacgctccc
ctgcccaccgaggaggagaccagggagagcgatgaggagctgcaggataccctcctcctc
ctctcccaggtcggccctgatgctcacatgcgcatgatcctgaggaaacatccagaacag
agggcagcggatgatttggagatcatttatgaggagctgcttcatataaaggctttatcg
cacctatccaccactgtaaagaaagaactagccggtgtcctgatctttgagtcccatgcc
aaagcaggaacagtgttgttcaatcaaggggaggaaggcacatcgtggtacatcattcta
aagggctctgtaaacgttgtcatttatggaaagggggttgtttgcacgctgcatgagggt
gacgactttggtaagcttgctctggtcaacgatgccccccgtgccgcctccattgttcta
cgagaggataactgccacttcctacgtgtggacaaggaggacttcaaccggattctcaga
gacgtggaggccaacacggtgcgtctgaaggaacatgatcaggatgttctggtcctggag
aagagccccagcagcatccagacctccacccacggcaccaccaccaccccctcccactac
aaatacactgtgatgtcaggggcaccagagaagattctggagcacttcctggaaatgatg
cgactggactctcacctcaacgaatcagacccagctctggacgactttgtgctcatgcac
tgcgtcttcatccctaacagccagctgtgcccggtgctcatggcccactaccacgctgag
gcgtcccagggctcagagcaggagcgtctggactacaccttgaacaacaagaggagggtg
atcaggctggtgctgcagtgggcctcagtacatggagatcaccttcaggaggaggacgcc
tcactagccttcctagaggagttctttgtgtctgtatctgatgatgccactaagattcct
gctctgaaagatcaactcccagagttagagaagctggttaaaaacagctctgacgatgcc
agatcctctccacaaaagcacaaagtcctgttgcggcagttcagcatgggggatgagaag
ctgcagaaacgacaggccatcaagagtaatgatgagatcctgttcaaagtgtactgcagc
gaccacacctacaccaccatccgggtcaccgtggctgcctcagtcagagaggtcatcagc
gcagtggccgacaagctggggtcagcagaggacctcctcctggtcaacctcagttcggcc
ggagataaagtggtgctgaagcccaacgatatttcagtcttctccacactcagcgtcaac
ggccgtctgtttgtctgccccagggatcaactggattcattgacacccttgccagagcag
gaagggccctccactggctccatgggcagctttgagttaatgagctcgaaagacctggcc
taccagatgactgtctacgactgggaactcttccactgtgtacatgagcatgagctgatc
taccatacgtttgggaggcagaacttcaagaagaccacggccaacatggacctgttcctc
aggaggttcaatgagatccagctgtgggtgatcacagagatctgtctgtgtgctcagctc
agcaagcgcgttcagatgctcaagaagttcatcaagatcgctgcccactgtaaggagtat
aagaacctcaactccttctttgctatcattatgggcatgagcaacccagccgtgagcaga
ctgagtcagacctgggagaaactacccagcaaattcaagaaattttacagcgaatttgaa
agcttaatggacccgtccaggaaccatcgggcgtaccggctcactgtggccaagctggac
ccacccatcattcccttcatgccgctgctgatcaaagacatgacattcactcatgatgga
aacaagacgttcattgacagtttggtcaattttgagaaaatgcgaatgatcgctaataca
gtgaggattgtgagatactgcagaagtctaccattcagtgcagagccgtctcagaccagt
aagaaccacccggacgtgcggagctacgtgcgccagctgactgttattgacaaccagaga
acactatctcatctctcccatagactggagcctcgcagaacctga
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