Salvelinus sp. IW2-2015 (Arctic char): 111960055
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Entry
111960055 CDS
T05762
Name
(RefSeq) tumor necrosis factor ligand superfamily member 12-like
KO
K05474
tumor necrosis factor ligand superfamily member 12
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111960055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111960055
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Tumor necrosis fators
111960055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
Fusion_gly
PM2_P3
Motif
Other DBs
NCBI-GeneID:
111960055
NCBI-ProteinID:
XP_023837713
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Position
LG37:5581813..5589757
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AA seq
253 aa
AA seq
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MIAGECGTTMHRILQRRKVRKLRFVWVFMAMVALSLAACSALFTAWTWRQTLDLSQSVKT
LQDRLEQVNTQRKAIVQLIMEKRELLVGQRVKRDGGTGRGKSGNGKKVASQFEITKESVQ
KVGADGLIKGWTDSEQLNMSKAVKYNTDRGTFTVERAGVYFLYCQVLFNENQSQLVKLEV
AVVKSGQPQQKLQCMEGYGTTPASGSHQFHFLKPCQVSGLLRLEKGAELQAITGAGFSLH
TTGKHYFSLFKVN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgatagccggggaatgtggaacgaccatgcatcgaattctgcagaggagaaaagtgcgc
aaacttcgcttcgtctgggtattcatggccatggtggctctgtcgctcgccgcctgcagc
gcactatttacggcgtggacctggagacagacgctggacctgtcccagtccgttaaaact
ctgcaagaccgattggagcaagtgaacactcagcgtaaggccattgtccaactcatcatg
gagaagagagagttgctggtggggcaaagggtgaaaagagatgggggaactgggagaggg
aagagtggaaatggaaagaaagtggcttctcagtttgagataaccaaagagtctgttcag
aaagtgggagctgatggcttgataaaaggatggacggactcggagcagttgaatatgagc
aaagcggtgaagtacaacacagacagaggcaccttcacagtggagagagctggagtctac
ttcctctactgtcaggtgttgttcaatgagaatcartctcagctggtgaagttggaagtg
gcggtggtgaagagcggccagccgcagcagaagctgcagtgcatggagggctatgggact
acgcctgcatccggatcccaccagttccactttctcaaaccctgccaggtgtctggcctg
ctgcggctagagaagggggcggagctacaggccatcacaggcgccggcttcagcctccac
accacggggaagcactacttcagcctcttcaaggtcaactga
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