Salvelinus sp. IW2-2015 (Arctic char): 111960169
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Entry
111960169 CDS
T05762
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
111960169
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111960169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111960169
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Nectin family
111960169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
ig
Ig_2
C2-set_2
TMEM154
Protocadherin
DUF7237
EphA2_TM
DUF5305
EzrA
LST1
Motif
Other DBs
NCBI-GeneID:
111960169
NCBI-ProteinID:
XP_023837834
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Position
LG37:5404750..5433467
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AA seq
616 aa
AA seq
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MKDIAVVQGDFVEPSPPYSLTFLAEAETQLPCQFKVEVGQVVVQVTWTKEKADGTKDQII
TVHHTDGHTEFGQYSGRVRFSSKKPTVDSSLIIMNTVESDEGRYNCHISTFPSGNFEQQL
SLTVWTTPISSLDPVILVEGQSFQLAASCRSVARPPPHLSWDTDLTGQSHNRSLEGGSVS
THFSLHPLRSMDGKRLDCLVGHPALKGPRRITNNLVVHYPPNAEISGFDQNWYAGLEEAA
LSCVSGGNPKPQSFNWTRKGGDLPEGVTTGNGSLLFNRPLVLTDAGIYQCVAMNSVGAGN
AEVEITVTELPQKQASFDSLLMVIVGGVAGVLLLVMIIIVISVTRHHKRKNKKLSRELTV
RKEEISTLSRQASFRKMNSVSMDTRGQTEENIPLRVEGTLRTSLSSVVEQGRIRESRSTL
VGGGGLDYLGRPVLYNSSRRGRESRAMDREEENRLRVESNEQNSTMSLANHLHPPLQPSP
FPMEQSIELLRSLNGSAIIPTEWGLHIRQGPGSRNTHSPLSCNNPPITDNEDEEDEGVEG
EWETCPRMSPLDQGRSEDQDSKTNSSQISEVECGLNPHFQQNNGTLRPKPPPKYRPNGIL
LTSSPHTSFIHKAQIV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatcgctgtggtgcagggggactttgtggagccctctcccccgtactccttg
accttcctggctgaggctgagacccagctgccctgccagttcaaggtggaagtgggccag
gtggtggttcaggtcacctggaccaaggagaaagcagatggcaccaaggaccagatcatc
acagtgcaccacaccgacggacacacagagtttggtcagtactcagggcgtgtgcggttc
agcagcaagaaacccaccgtggactcatccctgatcatcatgaacactgtggagtcagat
gagggcaggtacaactgtcacatcagcaccttcccctcggggaacttcgaacaacagctg
tcactcaccgtgtggaccacgcccatctcctccctggaccctgtgatccttgtcgaaggc
cagtccttccaattggctgcgtcctgccgctctgtggcccgccctccgccccacctctcc
tgggacacagacctaacaggccaatcacacaacaggagtttggagggtggttcagtctcc
acccacttctcgctgcatcccctgaggagtatggatgggaagaggctggactgtctggtg
gggcacccggctctgaagggaccacgcaggatcaccaacaacctggtggtgcactatcct
cccaatgcagagatctctgggtttgatcagaactggtatgctggtctggaggaagctgcc
ctcagttgtgtcagtggaggaaaccccaaaccacagagtttcaattggaccagaaagggc
ggagacttaccagagggcgtgaccacagggaatggatccttgctgtttaataggcccctc
gtcctgacggacgctggcatctaccaatgtgtggccatgaactctgtgggggcgggtaac
gcagaggtggagatcactgtgacagagttgcctcagaagcaggcgtcgttcgacagtctc
ctgatggtaatagtgggaggagtggccggagtactgcttctagtcatgatcatcatagtc
atctctgtgacccgtcaccacaaacgcaagaacaagaaactgtcgagggaactcactgtg
aggaaggaggagatcagtactctctccagacaggcatctttcaggaaaatgaactcagtc
agtatggacactagaggacagacagaggagaatatccctctcagagtggaggggacactg
cggaccagtctgtcctccgtagtggagcaagggcgcattagggagagtcggtctactctg
gtagggggcggggggctagactacctgggtcgacctgttctgtacaattcttcacgaaga
gggagggagagcagagccatggacagagaggaggagaacagacttagggtggagtcgaat
gagcagaatagcaccatgtctttggcaaaccatctccacccccctctccaaccctctccc
ttcccaatggaacagtccatcgagctgctgaggtccctgaacggcagtgccatcatccca
acggagtggggtttacatatacggcaggggcccggtagcaggaacacccactcccctctc
agttgcaacaaccctcccatcacagacaacgaagacgaggaggatgaaggtgtggagggg
gagtgggagacttgccccaggatgagtccgttggatcaggggaggtcagaagaccaggac
agcaagaccaacagttctcagatctcagaagtagaatgtggactcaaccctcacttccag
cagaacaatggaacgttgagacccaaaccgccccccaagtaccggcccaatggcatcctc
ctcacctcatcaccacacacctccttcatccacaaggcccagattgtatag
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