Salvelinus sp. IW2-2015 (Arctic char): 111960277
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Entry
111960277 CDS
T05762
Name
(RefSeq) putative transcription factor p65 homolog
KO
K04735
transcription factor p65
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04137
Mitophagy - animal
salp04210
Apoptosis
salp04218
Cellular senescence
salp04620
Toll-like receptor signaling pathway
salp04621
NOD-like receptor signaling pathway
salp04622
RIG-I-like receptor signaling pathway
salp04623
Cytosolic DNA-sensing pathway
salp04625
C-type lectin receptor signaling pathway
salp04920
Adipocytokine signaling pathway
salp05132
Salmonella infection
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111960277
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111960277
09143 Cell growth and death
04210 Apoptosis
111960277
04218 Cellular senescence
111960277
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111960277
04621 NOD-like receptor signaling pathway
111960277
04622 RIG-I-like receptor signaling pathway
111960277
04623 Cytosolic DNA-sensing pathway
111960277
04625 C-type lectin receptor signaling pathway
111960277
09152 Endocrine system
04920 Adipocytokine signaling pathway
111960277
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111960277
09171 Infectious disease: bacterial
05132 Salmonella infection
111960277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111960277
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
111960277
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
111960277
NCBI-ProteinID:
XP_023837968
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All DBs
Position
LG37:11924286..11934203
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AA seq
607 aa
AA seq
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MDGMYGWEQAPLNQGNPFIEIIEQPKQRGMRFRYKCEGRSAGSTPGEKSNDTTKTHPAIK
VHNYNGPLRVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVKK
KDVAEAVSCRLQTKNNPFNIPEANMWEEFDLNAVRLCFQASITLPTGELCPLEPVVSQPI
YDNRAPNTAELKICRVNRNSGSCMGGDEIYLLCDKVQKEDIEVRFFQDSWEGKGIFSQAD
VHRQVAIVFNTPPYCDTNLTEPIRVKMQLRRPSDREVSEPMDFQFLPSDPDEYGLMEKRK
RTEGMLQNLKLGSLMSGAMPAGTRPFNIARRTVTAKPAASQPVNPVAPPSXVSVKPQLYY
NGPQPGQLFQTQPKAEASTTAETWKFLNSLTLDSQPKATPVASFTTNPQASAATAASSQA
FPTVNLSDLHGFSFHTFACPQEPVSAAATPEPTSSFGVQGSQFKVDEELPEFPSFSEAQP
AGTLDSINIDDFQAMLGQSCLAGEGPKSSEASAPQAPCHLPSTNNEAQNQADPANHHISC
GGSTWMNYPNSIVNLLQNEGMMDSSPGNASQPAALDDLDVLSSIDEDRLMSILSSGNQYS
FVSGHQT
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatgtatggatgggaacaggcccctttgaaccaaggtaatcccttcattgag
atcattgaacagcccaagcagaggggcatgaggttcaggtacaagtgtgaggggcgctct
gcgggaagcaccccgggagagaagagcaatgacaccaccaagacacaccctgccattaag
gtccacaactacaatggccccctgcgtgtccgcgtctccttggtgaccaagaacccacct
cacaagccccacccgcacgaactagtggggaaagactgcaaacatggctactatgaggca
gacctgcaggagagacgagtacacagttttcagaacctgggcattcagtgtgtgaagaaa
aaggatgtggccgaggcagtttcctgtaggctgcagaccaaaaacaaccccttcaacatt
cctgaggcgaacatgtgggaggagtttgacctaaatgcagtgaggctgtgtttccaggcc
tcgatcactctgcctaccggggaactctgccctctggagcccgtggtgtctcagcccatc
tacgacaacagagcacccaacacagcagaactgaagatctgtcgagtgaaccgaaactct
ggaagctgcatggggggggatgagatctacttactctgtgacaaagtgcaaaaagaggac
attgaggtgcggttcttccaggactcgtgggaggggaagggcatcttctcccaggcggac
gtccacaggcaggtggccattgtgttcaacaccccgccctactgcgacaccaacctgacc
gagccaatccgagtgaagatgcagctccgcaggccctcggaccgtgaggtcagcgagcca
atggacttccagttcctgccctccgacccagatgaatatggactgatggagaagagaaaa
cggacagagggaatgttacagaatctgaagctggggtccctgatgtcaggggccatgcca
gcagggacaaggcctttcaacattgccaggagaacagtcaccgccaagccagcagctagc
cagcctgtgaacccagtggcgccccctagtgycgtctctgtgaagccccagctctactac
aacggcccccagccaggccagttgtttcaaacccagcccaaagcagaagcctccaccaca
gccgagacctggaagttcctcaacagcctgaccctggactcccagcccaaagccaccccc
gtggccagcttcaccaccaacccccaggcctctgcagccacagccgcctcctcccaggcc
tttcccaccgtaaacctgtcggacctccacggattttctttccacacmtttgcttgtccc
caggagccggtgagtgcagccgctaccccagagcccacctctagcttcggggtccaaggc
tcccagttcaaggtggacgaggagctacccgaattccccagcttttctgaggcacaaccg
gccgggactctagatagtataaacattgacgacttccaggctatgctgggccagagttgt
ctggctggagaagggccaaagagcagtgaggcgtcggcccctcaggcaccctgccactta
ccctccaccaacaacgaggcccagaaccaagcagacccagccaaccaccacatcagctgt
ggcggcagcacctggatgaactaccccaacagcattgtcaacctgctccagaacgagggc
atgatggacagttcccccggcaacgccagccagccggccgcccttgacgacctggacgtc
ttaagctccatagacgaagaccgtctcatgtccatcctgagcagtggcaaccaatacagt
tttgtgtccggacatcagacctaa
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