Salvelinus sp. IW2-2015 (Arctic char): 111960703
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Entry
111960703 CDS
T05762
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111960703
Peptidases and inhibitors [BR:
salp01002
]
Metallo peptidases
Family M10
111960703
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Peptidase_M66
Reprolysin_4
Reprolysin_3
Peptidase_M43
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
111960703
NCBI-ProteinID:
XP_023838641
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Position
LG4p:22097878..22101664
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AA seq
463 aa
AA seq
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MEITGLLLLVVVAQSFAMPLSSLEETDKRLLAEKYLRRFYNLQAGLQGTKTHRSSDAMQA
KIREMQSFFNLQVTGSLDANTLELMSMARCGVPDVGEYNHFPRNLKWQNTNVTFRIVNYT
PDLKKADVDRAIRNAFNIWADVTPLTFKKLHEGKADIMISFGTKEHGDFNPFDGPDGLLA
HAYPPGRDIGGDTHFDEDEHWSKDSDSYNLFLVATHEFGHALGLSHSTDPGALMYPVYSY
SQGYPLSEDDITGIQALYGPNPTRKVKPKPDAPNKCDPMLSFDAVTELRGETIIFKDRFY
WRLHPQFAEPEQTLIKSTWPSLPNKVDAAYEYPEKDMVFIFSGIRMWALNGYNLVEGYPK
YIHKLGLPRTVRTVDAAVYIPDTGKTLLFSEEHYWSYDEKTNTMDSGFPRSIEMDFPGMA
DEVDAAVYQYGYLHFFHEHTQFEYSYSARKVIQIVRTNSFLNC
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcacaggtttactgctccttgtggtggttgctcagtcatttgctatgcctctg
tcatcgctggaggagactgataagaggctattagccgagaaatacctccgcaggttctac
aaccttcaagctggacttcagggaacaaagacccacaggtcttcagacgccatgcaggct
aagatcagggagatgcagtccttcttcaacctccaggtgacggggagcctggacgctaac
accctggagctgatgagcatggccaggtgtggtgtccctgacgtgggggaatacaatcac
ttcccccgaaacctcaaatggcagaacaccaatgtgaccttcagaatagtgaattatact
cctgatctgaagaaggctgatgtggacagagctatccgtaacgccttcaacatctgggct
gacgtcactcctctgaccttcaagaaactgcatgaggggaaggctgacatcatgatttca
tttgggacaaaagaacatggagacttcaacccctttgacggccctgacggtctcttagcc
catgcctatccccctggcagagacattggaggagacacacactttgatgaagatgaacat
tggtcaaaagactcagactcctacaaccttttcctggtggccacccatgagtttggccat
gcccttggcttgtcccattctactgatcctggggctctgatgtacccagtctactcctac
agccagggttacccactgtctgaagatgatatcaccggcattcaagctctttatggcccg
aaccccaccaggaaagtgaagcccaagccagatgccccaaacaaatgtgaccccatgttg
agttttgatgctgttactgagctcagaggagaaacaatcatattcaaagacaggttttac
tggcgtctccatccccagtttgcagagcctgagcaaaccctgatcaaatccacctggccc
tccctccccaacaaagtggatgctgcctatgagtaccctgagaaagacatggtcttcata
ttcagtggtattagaatgtgggccctgaatggctataacctggtggagggctaccccaaa
tacatccataaactgggactccccaggaccgtgcggacggtggatgctgctgtgtacatc
ccagacaccggcaagacccttctgttctctgaggagcattactggagttatgatgagaag
actaacacaatggacagcggcttcccaagatccattgagatggatttccctggaatggca
gatgaggtggatgctgccgtatatcaatatggatatttgcatttcttccatgaacataca
caatttgaatacagctacagtgcaaggaaggtcattcagattgttaggacaaactctttt
ctcaactgctga
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