Salvelinus sp. IW2-2015 (Arctic char): 111960971
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Entry
111960971 CDS
T05762
Name
(RefSeq) NT-3 growth factor receptor-like
KO
K05101
neurotrophic tyrosine kinase, receptor type 3 [EC:
2.7.10.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
111960971
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111960971
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111960971
Protein kinases [BR:
salp01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
111960971
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
I-set
Ig_3
LRR_5
Haspin_kinase
LRRNT
ig
TrkA_TMD
Ig_2
LRR_4
LRR_1
C2-set_2
Motif
Other DBs
NCBI-GeneID:
111960971
NCBI-ProteinID:
XP_023995471
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All DBs
Position
LG4q.1:29:complement(59938085..60199352)
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AA seq
696 aa
AA seq
DB search
MDLFFIPPRICWWRVLFLLSIFQDYLSNMLDCPPTCSCSPTEIYCNKSDNGKFFPLLALQ
DTGNNGNNSIEDLFKNITSIHIENWTGLQTLKDVDMELYTGLQRLTIMNGNLRGIQARAF
SQNPHLRYINLSKNPLTTLSWQLFQNLQLFELAPHSSPELPGCEDLEGRGVRGVVVPPTI
LKLDEPERRHETCIEFTVRGNPQPTLRWFHRDKEIPPSDYIRTEMDTYQDYLEGCLNFKD
PTHHNNGNYTLEASNFLGVTTKTVYGHFLNAPFSDDYGDYGTPTPTITVTHRPEEDTFGV
SIAVGLAGFACVLLVVLFVLINKYGRRSKFGMKGPVAVISGEEDSASPLHHVNHGIITPC
TLDAGPDAVVIGMTRIPVIENPQYFRHEDTTVKQPATYVQHIKRRDIILKRELGEGAFGK
VFLAECYNLSPTKDKMLVAVKTLKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCVDGD
PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPLQTNGELGLSQMLHIATQIAAGMMYLA
SQHFVHRDLATRNCLVGNGLLVKIGDFGMSRDIYSTDYYRGCVGGHTMLPIRWMPPESIM
YRKFTTESDVWSFGVILWEIFTYGKQPWFQLANNEVIECITQGRVLERPRVCPKEVYDIM
LGCWQREPQQRLNIKDIQKILYALGKATPVYLDILG
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggatttattttttattccaccacgaatttgctggtggagggtattgtttcttttgagc
atcttccaggactacttgagcaatatgctggactgcccgccaacctgcagctgctctcca
actgagatctattgcaataagtctgacaatgggaaattctttcctctgcttgcactgcaa
gatactgggaacaatggaaataacagcatcgaagatctgttcaagaacatcacctcaata
cacattgagaactggactggcctgcagaccctgaaggatgtggacatggagctgtacact
ggacttcagagactaacgatcatgaacggcaacctgcgtggyatccaggccagagccttc
tcccagaacccccacctgcgctacataaacttatcgaagaatcctctgaccacattatca
tggcaactcttccagaatcttcaactcttcgagctagccccacactcttcaccggagctg
cctgggtgtgaggatctggagggccggggtgtgaggggggtcgtggtcccccccaccatc
ctgaagctagacgagcccgagcgtcgccatgaaacctgcatagagttcacagtgcgtggc
aacccccagcctaccctgcgctggttccaccgggacaaggagatcccccccagtgactat
atccgcactgagatggatacctaccaggactacctagagggatgcctcaactttaaggac
cccacgcaccacaacaacggcaactacactctggaagctagcaacttcctaggagtcacc
accaagacagtgtatggacacttcctcaacgcccctttttcagacgattatggtgattat
gggactccaacaccgaccatcacagtaacacacaggcctgaggaggacacattcggggtg
tctattgctgtgggccttgccggatttgcctgtgtccttcttgttgtcctgtttgttctc
atcaacaaatatggccgacgttcgaagtttggaatgaaaggaccagtagcagtgatcagt
ggtgaggaggactcggccagccccctgcaccatgtcaaccatggcatcatcaccccctgt
acccttgacgctggaccagacgctgtggttatcgggatgacccgtatccctgtcattgag
aacccgcagtacttcagacatgaggacacaactgtaaaacagcctgctacctatgtacag
cacataaagcgtcgggacatcattctgaagcgggagctgggagagggggcctttgggaag
gtgtttctggcagagtgctataacctcagccctaccaaggacaagatgctggtggctgtc
aagacgctgaaggaccccacccttgcagcgagaaaagatttccagagggaggcggaacta
ttgaccaacctgcagcatgagcacattgtcaagttctatggtgtgtgtgttgatggagac
cccctcatcatggtctttgagtacatgaagcacggggacctcaacaagtttctcagagcc
catgggcccgacgctatgatcctggttgacggacagccgctgcagaccaatggggagctg
ggcctatctcagatgctgcacattgccactcagatcgccgcggggatgatgtacctggcc
tcccagcactttgtgcaccgtgatttagccactcggaactgcctggtgggcaacggcctg
ctggtgaagattggtgactttggaatgtccagggacatctacagcacagactactacagg
ggctgtgtggggggccacaccatgctgcccatccgttggatgccccctgagagcatcatg
tacaggaagttcactacagagagcgacgtgtggagctttggtgtgatcctctgggagatc
ttcacctacgggaagcagccatggtttcaactggccaacaatgaggtcatcgagtgtatt
acgcaaggacgggttttggagaggccacgagtttgtcccaaggaggtgtatgacatcatg
ttgggttgctggcagagggagccccagcagaggctgaacatcaaggatatccagaaaatc
ctctatgccttgggcaaagctacgcctgtctacctggacatcctgggctag
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