KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111961481
Entry
111961481         CDS       T05762                                 
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    111961481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:salp03000]
    111961481
   04121 Ubiquitin system [BR:salp04121]
    111961481
   03036 Chromosome and associated proteins [BR:salp03036]
    111961481
Enzymes [BR:salp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     111961481
Transcription factors [BR:salp03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    111961481
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     111961481
Chromosome and associated proteins [BR:salp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    111961481
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     111961481
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like F-box JmjC Cupin_8 LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 111961481
NCBI-ProteinID: XP_023839551
LinkDB
Position
LG4q.1:29:12834396..12890831
AA seq 1423 aa
MQYRGQTGTTIFERKSFTILRTKWKKNVFYIRQIKRSICRTMYDENEDFSDVEEIANVRG
FNLEEKLVSDSYNTHFVQLMDGKDFTYEYVQREALQTPLIFKAKDGLGIRMPDPEFTVSE
IKGLVGSRRAVDVMDVSTQKGSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLI
KRPTVVDLVDWVDNMWPLKLKRRQTEATNVISEMKYPKVQKYCLMSVKGCYTDFHIDFGG
TSVWYHVFKGGKVFWLVPPTPHNLALYEDWVLSGKQSDIFLGDRADGCQRVELKQGYTFF
IPSGWIHAVYTPEDTLVFGGNILHSFNIPMQLSIYEIENRTKVNSKFRYPFYHEMCWYVL
ERYVHCLTKRSHLTPEFRREPLLIDLETKLSTESPSSDSRSQDMDEEDSCETQQGRDEQG
DRSAFDDPCSPDNRKGKSSGLRHLKAALSNDSEDSCIPTSTQPPEFPKTPFGSPVSESPS
KWTHLTEFELKGLKALVEKLEALPENKKGVPDGIKDPQALLEDMKVVLKEHEDDDPKMAA
TGVPVVFWPKKSAKQQRPPNRPKPKMAASSPAAAVKLSASRSTSGARRRRTRCRKCEACL
RTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEDK
FNRMLMECSICNEIVHPLCLKVKDSGGVVNDELPNCWECPKCNHSGKTGKAVKQKRGPGF
KYASNLPGSLLKDSRLNRDIKEEPDPPSLPTSPTGTTATVTTVKRKAERDDTPKTKAEES
PPLKKRSPMMSLGGLPRPRPEDNPLRKKRMLFDIKDEDEPPVVKKKKKPPKPDDLLIPKL
LKTIKQEQVDEDEEHKDHEDEEEDRCTGDRVATKGKREEEEEDGDEEKDGGVEDSKDGTV
KTMLSPLLRTSTARESDQSCSSSPRAGPSSEGCDAPEKTPGQLKARKRRRLPNKELSKEL
SKELNLEIQKTEDCLANQNRRPLKREDSPANNSRRPLKTEDSSTNPNRRPLRIEDSPANH
NRRPIKTEDGLSNHNRRPLKIEDRLVNRNHRPMKTEPESDGEEPKPKRPLNNCTSDLGDW
LHPRGRELNGTARQLSPLGWSRSPPITPICPRPPPCRSPPKCVQMERHVIRPPPISPPPD
RLPLEDGQTHMMHREVWMAVFGHLAHRDLCVCMRVCKTWNRWCCDKRLWTRIDLNRCKSI
TPLMLSGIIRRQPVALDLSWTNISKKQLSWLINRLPGLRMLLLSGCSWVAVSALCTASCP
LLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQLDNRSKLRNVVDLRLAGLDITDTSLRLL
IRYTPQLTRLDLSYCNHVTDQSVNILTAAGTTTRDSLTDINLSVCNRVTDQSLTYFKRCG
SICHIDLRYCKQVTKEGCERFIAEMSVSVQFGLVEEKLLQKLC
NT seq 4272 nt   +upstreamnt  +downstreamnt
atgcaatacagaggacaaacaggtacaacgatttttgaacgaaaatcgtttaccatttta
agaacaaaatggaagaaaaatgtgttttatattagacaaattaagcgctccatctgccgg
acaatgtatgacgaaaacgaggacttctctgacgttgaagaaattgcaaatgtcaggggt
ttcaatctggaggagaaacttgttagcgactcatacaacacacatttcgttcagttgatg
gatggcaaagatttcacttatgagtatgttcagagagaggcacttcagacccctcttatt
ttcaaagccaaagatggactgggaatcagaatgccagacccggagttcaccgtcagtgag
attaaaggtttggttggtagccgtcgtgccgttgatgtgatggatgtgagcacccagaaa
ggctctgagatgagcatggcccagtttgtccgctactatgagacgcctgaggaagagagg
gacaaactcttcaatgttatcagcctagagttcagccacaccaaactggagaacctcatc
aagaggcccactgtggtggatttagtggactgggtggacaacatgtggcccctaaaactg
aaacgaagacaaaccgaagccactaatgtcatctcagagatgaagtaccccaaagtacag
aagtactgtttaatgagcgtgaagggctgctatactgacttccacattgatttcgggggc
acgtctgtgtggtatcacgttttcaagggagggaaggtgttctggctggtgcctccgacg
cctcataaccttgccctgtatgaggactgggttctgtcaggcaagcagagtgacatcttc
ctgggagaccgtgcagatggctgccagagggtggagctgaaacagggctacaccttcttc
atcccctctggctggattcatgcagtctacacccctgaggacacgctggtgtttggaggc
aacattctgcacagctttaacattcccatgcaactctccatctatgagatagagaatagg
actaaggttaattccaagttccgctacccattctaccatgagatgtgctggtatgtcctg
gagaggtacgtgcactgcctgaccaagcgctcccatctcactccggagttccgcagagag
cctctgctaatcgacttggaaactaagctgagcacagagagcccctcctctgactcccgg
agtcaggacatggacgaggaggactcctgcgagacgcagcagggacgagatgaacagggt
gacaggtcagcatttgatgatccctgctctcctgataacaggaagggtaaatccagcggc
cttcgacatctcaaagctgccttgtccaatgattctgaggacagctgcatccccacctcc
acccagcccccagagttccccaaaaccccctttggctcgccagtctcagagtctccgagt
aaatggactcatctgactgagtttgaactgaagggcctcaaggcccttgtggagaaactg
gaagccctccctgaaaataagaagggtgttccagatggcatcaaggacccccaggccctg
ctggaggacatgaaggttgtcttgaaggaacatgaagatgatgaccccaaaatggctgcc
actggagtacctgtggtgttctggcctaagaagtctgccaagcagcagcggcctcccaac
agacccaaacccaaaatggcggcctcgtctcctgcggcggcggtcaagctgtcggctagc
cggagcacgtctggcgcccggaggaggaggacgcgttgtcggaagtgcgaggcgtgcctg
aggacagagtgtggagaatgccacttctgtaaagacatgaagaagtttggagggccaggt
cgcatgaaacagtcctgcatcatgaggcagtgtatagcgcctgtcctgccccacacagcg
gtgtgtctggtgtgtggagaggcagggaaggaggacacagtggaggaagaggaggacaag
tttaaccgcatgctcatggagtgctccatctgcaatgagatagtccatcctctctgcctc
aaggtgaaagattccggtggagttgtaaatgacgagttgccaaactgctgggagtgtcca
aaatgcaaccattcagggaagacagggaaagccgtcaagcaaaaaagaggaccagggttc
aagtacgcgtccaaccttcccgggtcgctgctgaaggactcacgattgaaccgtgacatc
aaggaagagcccgacccgcccagtctgccaacatcacccactgggaccacggcaaccgtg
accacagtgaagaggaaggcggagcgtgatgacacccccaaaacgaaagcagaggaatct
cctcctctgaagaaacgttctcccatgatgtctctgggcgggctgccccgaccaaggcct
gaggacaaccctctgaggaagaagaggatgctgttcgacatcaaagatgaggacgagcct
cctgttgtcaagaaaaagaagaagcccccaaaacctgatgaccttttgatccccaagctg
ttaaagaccattaagcaagagcaagtagatgaggacgaagaacacaaagaccatgaagat
gaagaggaggacagatgcacaggggacagggttgcaactaaagggaaaagagaagaggag
gaagaggatggagatgaggagaaagatggtggtgtagaggacagtaaagacggtacagta
aagactatgctgagtccactgctacggacgtctacggccagagagagtgaccagtcctgc
tccagctctccccgggcagggcccagcagtgaagggtgcgatgccccagagaagacacct
ggccagctgaaggcacgcaagcgccgccgcctccccaacaaagagctgagcaaggagctg
agcaaagagctcaatctggagattcagaagaccgaggactgcctggccaatcagaaccgc
agaccactgaagagggaggacagcccagccaataacagccgtcgacccttgaaaactgag
gactcctcgaccaatccgaaccgcagaccactaagaatagaggactctcctgccaatcat
aaccgcaggccaattaagactgaggatggcctatccaatcacaaccgccggccattgaag
atcgaggacaggttagtcaatcggaatcacaggccaatgaagacagagcctgagagcgac
ggggaggagcctaagcccaagcggccactcaacaactgcaccagtgacctcggagactgg
ctccaccccagggggcgggaattaaatgggacggcccgccagctctcgcccctggggtgg
agccgcagccctccaatcacacccatttgcccacgcccccctccctgccgctcaccgccc
aagtgtgtccagatggagcgtcacgtgatccggccgcctcccatcagccccccgccagac
agactgcccctggaagacggacagacccacatgatgcacagggaggtgtggatggccgtg
ttcgggcacctcgcacacagagacctttgtgtctgcatgcgcgtctgcaaaacctggaac
agatggtgctgtgataagaggctgtggacgcggatcgatctgaaccgctgtaagtccatc
actcccctcatgctgagtggcatcatccgcagacagcctgtggctctggacctcagctgg
accaacatctccaagaagcagctcagctggctcatcaacaggctgccaggtctgcggatg
ctgctgctctcaggctgctcctgggtggctgtgtctgccctctgcactgccagctgcccg
ctgctgaggaccctagatgtccagtgggtagaggggctcaaagatgcccagatgagggac
ctgctctcaccccccacagacaacagaccaggtcagctggacaacaggagtaagctgcgg
aatgtggtggacctgcgtctggccgggctggacatcacagacacctccctgcgcctcctc
atccgctacacgccccagctgaccagactggacttgagctactgcaaccacgtcactgac
cagtcggtcaacatcctgaccgctgctgggaccaccaccagagactcgctcactgacatc
aacctctccgtgtgcaacagagtcacggaccagtcgctgacctacttcaagcgctgtgga
agcatctgtcatattgacttgcgctactgcaagcaggtgaccaaggagggctgtgagcgg
ttcattgctgagatgtcagtgagtgtacagtttggacttgtagaggagaaactactgcag
aaactctgttag

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