Salvelinus sp. IW2-2015 (Arctic char): 111962113
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Entry
111962113 CDS
T05762
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111962113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111962113
Enzymes [BR:
salp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
111962113
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111962113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
111962113
NCBI-ProteinID:
XP_023840717
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All DBs
Position
LG4q.1:29:51265700..51274092
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AA seq
348 aa
AA seq
DB search
MAHMVVSHELMAQQEPANIAKAPAKKRGRTAQPKEPKPPKMPKAKPGPKAKPGPKAKPGP
KAKPGPKPKKGKEGQEADGTQEKIDKTFKKVKKKRDRFKGMTEDEVMSRTLTDILDYNLD
YVIIGINPGLVAAYVGRWFPGHGNHFWKCLFLSGFTDEQLNHMSDTSLPEKYKIGFTNMV
ARTTPGSKDLSTKELREGALILAEKLKKYKPLIAVFNGKCIYEMFCREMFGKKPKKLDFG
LQPHKIPDCEVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRNQLRGVARSDEIQELEY
SFDLGLAKEDAKRMAIKEEAYDPGYEAAFGGAYGEGGPGPEEGQXNGH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggctcatatggttgtcagtcatgagctcatggctcagcaagagcccgccaacatagcg
aaagctccagcaaagaagcgagggagaacggcacaaccaaaggaacccaagccacccaaa
atgcccaaggccaaaccgggacccaaggccaaaccgggacccaaggccaaaccgggaccc
aaggccaaaccgggacccaagcccaagaaaggtaaggagggtcaagaggcagacggcacg
caggagaaaatagacaagaccttcaagaaggtcaagaagaaaagggaccgcttcaaaggc
atgactgaggatgaggtcatgagtagaactctgaccgacatccttgactacaacctggac
tatgttatcattggaatcaacccaggcctcgtggcagcctatgttggacgatggttccct
ggccatggaaaccatttctggaagtgcctgttcttgtccggattcactgatgagcagctt
aaccacatgagcgacaccagcctgccagagaaatataagatcggcttcaccaacatggtg
gcaaggacaacgcctggaagcaaggacctgtcaaccaaggagttacgcgagggcgccttg
attcttgctgagaagttgaaaaagtacaagcccctcatagctgttttcaatggaaaatgt
atctatgaaatgttctgcagagagatgtttggtaaaaagcccaagaagcttgactttggt
ctgcagccacacaagataccggactgtgaagtggcgttgtatctgatgccctcatcgagt
gcccgctgcgcccagtttccccgtgcccaggacaaagtgcacttctacatcaagctgagg
gaattgaggaaccagctcaggggcgtggcccgatctgacgagattcaggagttggagtac
agctttgacctgggactggccaaagaggacgctaagaggatggcgatcaaggaagaggcg
tacgacccaggctacgaggccgccttcggcggagcgtatggcgagggcgggcccgggcct
gaggagggccagaycaacggtcactaa
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