Salvelinus sp. IW2-2015 (Arctic char): 111962836 Help Entry 111962836         CDS       T05762                                  Symbol lg4q.1:29h5orf42 Name (RefSeq) protein JBTS17   KO K22859   protein JBTS17 Organism salp  Salvelinus sp. IW2-2015 (Arctic char) Brite KEGG Orthology (KO) [BR:salp00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:salp03037]     111962836 (lg4q.1:29h5orf42) Cilium and associated proteins [BR:salp03037]  Primary cilia and associated proteins   Ciliogenesis and planar polarity effectors (CPLANE) complex    111962836 (lg4q.1:29h5orf42) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Joubert Motif Other DBs NCBI-GeneID:  111962836 NCBI-ProteinID:  XP_023841936 LinkDB All DBs Position LG4q.1:29:complement(11714749..11746453) Genome browser AA seq 3343 aa AA seqDB search MELKLEVVLSSSIKRKKPWPRFCWLGLEKESVFLLDDKRISEINMVSGRTKKKTPKLQPL LPRVVTMAASQNGVWLAGLLVSGEMFLWSRDKDFLKTVAAVPTEAQLVTAAQGSGVCLSL VVSGDGMRVLLLTVTGQVFLWECVDVRDLSGVRDGTARGRWAQIQHPGNTALPSPKDKEA SQHSIFVRGEAVGDICLSAFVFTSEVELSVTFLKIQWEEGQRSSPVGYSVRWVTKTYPMS CLTPPCRPVRSRGSLVPAFSPDGLLLAVVLNQRDPRATQVLFVSTQNFMIVSSGLGGCGS KKLVIPSKYVRSYWVGSVSWAAGGLYLACVLKRGSFLMLARLGGLLSLSTSGCNVDFGPA HFLPLHPLVTYRPPVSVGGAGVDPLSSSSLSVRDVLRQRYSVTWHPRLPYLIVSDGYMAT VLRVPEQPSPATLLRALLHDTSQGLETASRALERTQPHARAWLESISCLNPSSSLQELRA RATPVPTPTATATSTLPLFLQDQGGLGDTRELIQRVQALFEDDSDLEGPPAGSHVEDRGR LEFASMFDTLHALSDTLADLDPSPRPDPDASSADSERXPPTLPPELRGVQGSLLTAWALG VSLGGVVEQRECLLKHTVRCAVRFAALLRLISIPSXHTGKRKNSSVPFSSRLLQLLRSLL SFLPWGAPHTGGRSFLGLVVELTQQLVGLLLTSPPDLYQTGQASSEPSSQTLSTALLLLQ LTSHSMDHTYSLQQKCAHTDVYCVLFLQEEGGGPSQQDLPLHQRPSSRLRGAWRAVYRHT LQYWEELKYRRSGTGWEEEQGRVSVILSQIQTALQGMGERLEEGPTLLSYTGEQHFLFGS YSESVQAWRAELWAERERDGPRSAFLETRLLLSLLYGLLFQYHLKEAQGLGDHMARLLLH QAGPHGDDSAHNAEEALPGSWLPEEVHREAACAVVQTLGRFMASYFTNQPLLILPPHSVD VLPPLHLPRAPGVGRLVPLCQEGVAGAVRGQQLSEVWTVGYALDLLLQGGLLPEATWLAH RLGDWKTAVSLGLAYTTYSTEHCDFTGLRWRELHLSAALEPVSLFQGQLESLLGRKARSE ETQGDEENYKSFTDSLEGEDVELLQGSVQEILKASVMAGVDVLSQPLGALLDSAKDLSSC LPALVPMGLYLPAPPLYCPQPAPNTQDPSGGFGQLLEGASRHRVSGVLQRVLLLLRSARC SRPAAQWYISHLRRSRHRLDKDSRGEEELGGKRKRGKRTGTGKNRIAGGEEVETGVRTRI AGGEEGWRTARGKNRDQTGGERLEKAGKNRIRQAGKMGWRQGVKSGIAGGEDGLALQGAR NLVCFRELCGLCWMLNVRDQLSMSCRKYQAARNHGRDPQVPADDSEVTAACEEALHWACR FLPFSRFLNAEEIIQDTLLSLVSELPPVTLVAETLVQAFPEEEESVRVPLREKYNSLLRR LRHCTVPASGQNGNKRDEEEGEEVMMILVQERLRQRRKDLKRLARHLAPLELYLWEREEE QDRRGGGQGAVALLERFSLGASLSNSTLTDCGRPLVYSDGDTAENSVALSPDLHSRPPHS ISKRVRVQDRADKPGSQVEVVEGGSIQEEDQSCTGPAQDPAVGEDSPSLTLPVVGTWEFE LEDEEYLRFLELFLSYVLEKDGPDPDAGSDPPLLKGFCSQLRERELHSLTFDVLTTLRRR QRDGRQATRRQGGSDXPVFRAGHCYKPVLLTTPSFLHSEPPTPRPSMSVSVLSLPGLRTG REQGLFGFSLQARPASPRPEPTPQRSRLGSKSSPSQSSVPWEQPSEGWAFGPLCSVEAVE LQQELEPKLEAQFPGLGRLLEWMVRWADKKVLLGQPSRMKEREAGGGEVAGGGVVIRVKA SAPAVLTALSMLEHRYTTALLGMDHYSANLQVPERQWTVAPVLQPEVGWKLERESSVDTG YPASAGTPITLPDQDPQHCELSYGSQTEGVERVTSQETSQLSDPVGVTLINPESGVADFP DNKLDLSAEKGEDSNADEALRSSASLAIPNISVHIKSLRPTQSPPGQALTLADLRCSERE EDIVSSQEEEENLLSHGSLRRPSDITEEVTRNITPSEGSVSDVPPRASFQHLPVAEPQAG AQAADSAPNGGLPQGSTNTTPASAPIQTLPAQTDPVRQLLQDELFRLVQLQQINFMSLMQ VVGASFVNLPVSQNNTLPAQSNVPYPHPNAPLSHPNTLLPHLNLTPSQNNMSPMPQTQSS VQASEPPSGGDRPTDQPPIHEMQPLAVHPEPLRDIQGETRTLISSSHGLQTTVDPTCSAP LLLPSGGSSQVPAPYSSGLKLLQLHPPLLSLQRHGNTAPVREAWGPPSERRPSTTVPPHL NPSQYDPAALRRAEERTREAERESTAPPSHLNLTQYAHYPSNQAPRNTLPPLQNPETRVE RSRGAEPPHLPPTLPSHRPPPVHGLPLLRFHPDPRPPTTFALIPFPHSSRPLTVTPAATG HNPRLQLLQRDPDPPRMMLPEATPPARVPRLIPLGELMGWAAGRQRGAEARLQLLRVAPP AQNPTPATPSTSTNSSRRQKRQVERLKREGEKAEVTFRPEDSIILPRERNEDEPAEPVLG EGYVFPLGTFDSVLTGQGLVDRALSTAAELHAFASTHKRPPESHDACTNTDPASPHSDTG ISAQPTVTSAASGPAALPPELFLNLRFPRDPPVHDTETSGEKRPERNTGRQFINVIDLED GALLQELTSCPRPAVRDHNVNPSQPSPPTSAQLHLLAASVTNSAPSELTADTSTEDDQPQ AQPDGFSVASLPPAHPEPSGDPVTRSLLQERRAPGRSLETHRGAPSRAPVIQASARLSEM DAQLAALQNIADHMESEFANTRLLVSTIETLGPAMAPERVEGRTPVNKTVTLATSPEGWR SHLSVHHDLELAGLRQEEEEEEEGPDSVVVSSAPWGVKQPFSLSXHTPAXQSTSTLHQPT PTGLWLSPVRPEPEQRVWDMGQDLTDTMDGAPGKWAEETLGLSGLSDVADILAELVREGG ISPTALGLSHTQAARLNSRLDQQQSGRAGQRGMRAEEERRELRVWMRRKQREKLVEYRRQ REEKRERERKPFSAPVTLKPTSKDININKKIKEEKDKTVLLEHHNQRARDACSLITDLLT TPLTLPNNANRTLNLPATSTRPLTAQTVGSTRSSPRGRSLSVGGRRRTSTKPQTGRARSL SSPGVTPRSERRPASSGGQETLTSRLGLHRPASFLPGDRLSQVTRRGMITDLRGRTGTGP KTPSQQEWRREVIQSSPGRRGGGTREQRETEEREEEVVSPWNPPPEICRLLGLENSDGQG GVVARAGGTGLDRLDTLSESTGSILSKLDWAAIESIVASEGAI NT seq 10032 nt NT seq  +upstreamnt  +downstreamnt atggagctgaagctggaggttgtgttgtcatcgagcatcaaacggaagaaaccatggcca cggttctgttggctcggattggagaaggagtctgttttcctgctggatgacaagcggatc agtgagatcaacatggtgtctggacgcaccaagaagaagacccccaagctgcagcccctg ctccccagggtggtaaccatggccgcatcccagaacggtgtgtggcttgccggattgctg gtctcaggagagatgtttctatggagcagggacaaagacttcttgaagaccgtggcagca gtcccgacagaagctcagctcgtcactgcagcacaggggtctggcgtgtgcctgtctctg gtggtttcaggggatgggatgcgggtgctgctgttgactgtgacagggcaggtgttcctg tgggagtgtgtggacgtgcgtgacctgtcaggggtacgggatggtactgctagaggacgc tgggctcagatacagcaccctggaaacactgctctgccatccccaaaggacaaggaggca tctcaacacagcatcttcgtcagaggggaggcagtgggtgatatctgcttgtcagctttt gttttcacctcggaggtggagctaagtgtcactttcttaaagatccaatgggaggagggt cagaggagcagtcctgtggggtacagtgtacgctgggtcactaagacataccccatgtcc tgcctcacaccaccctgtcgtccagtgaggtccagggggtcactggtgccagccttctcc cctgatggcctgctgttagctgtagtcctgaaccaaagagaccccagggctacgcaggtt ctctttgtcagcactcagaactttatgattgtctccagtggactggggggatgtggcagc aagaaactcgtcattccttctaaatatgtgaggtcgtactgggtgggcagtgtgagctgg gctgcgggagggctctacctggcctgtgtgctgaagaggggctccttcctcatgctggct cgtctgggggggctgctctctctgtctacctcagggtgcaatgtggactttggccctgct cacttcctgcccctgcatccgctagtcacttacagacctccagtctctgtcgggggggct ggggttgaccctctgtccagctccagcctgtctgtacgggatgtcctgagacagcgctac tcggtgacctggcacccgcggctgccctacctcattgtgtctgatggctacatggccaca gtgctgcgggtacctgagcagccctcccccgccaccctcctcagggctctgctgcacgac accagccagggcctggagactgccagccgggcactggagcgaacacagccccatgccagg gcgtggctggagtccatatcctgtctgaatcctagtagcagtctgcaggagctgagagcc agggccacacctgtacctaccccaacagccacagctacatccaccctgcccctcttcctg caggaccagggaggcctgggggacaccagggagctgatccagagagttcaggctttgttt gaggatgactctgatcttgaaggaccgcccgctggttcacatgtggaggaccgaggacgg ctggagtttgcctccatgttcgacaccctccatgccctctcagacaccctggctgatctt gaccccagtcctcgccctgaccctgatgctagctctgcggactcagagaggastccccca accctccctcctgagctccggggggtccagggcagcttgctgacagcgtgggctctgggt gtgtcattaggtggcgttgtggagcagagagagtgtctgctgaagcacacggtccgctgt gcggtccgcttcgctgctctcctccgtctaatttccatccccagctyccacacgggaaag agaaagaacagctccgttcccttctcctcccgcctcctccagctcctcagaagccttctc tctttcctcccctggggtgcccctcacacaggggggaggagtttcttgggtttggttgtg gagcttactcaacagctagtgggtctgctcctcacctcgccccctgacctctatcagact ggccaggctagctctgagccctcctcccagaccctgtccacagctctgctcctcctgcag ctgacctcccacagtatggaccacacctacagcctccagcagaaatgtgcccacacagat gtctactgtgtgctattcctgcaggaggagggaggggggccatcacaacaggatctgcct ctccaccagcggccctctagcaggttgcggggagcgtggcgtgcagtatacaggcacacc ctgcagtactgggaggagctgaagtaccgtaggagtggtacgggctgggaggaggagcag ggccgtgtgtctgtcatcctgtcccagatccagacagctctacaggggatgggagaaagg ctggaggaagggcccactctgctgagctatacaggggaacagcacttcctgtttggttcc tactcagagagtgttcaggcttggagagctgagctgtgggcagagagagagagagatggg cctcggagtgcgttcttggagacacgtctgttgctgtccctgctgtatggactgctgttc cagtaccatctgaaagaggcccaggggctgggggaccacatggcycgtctgctactccat caggctggaccacatggggacgatagtgcccacaacgctgaggaggctcttcctggctcc tggctgcctgaagaggtccacagggaggcagcctgtgctgtagtacagactctgggaagg ttcatggcctcatatttcaccaaccagccccttctcatcctgccccctcacagtgtggat gtactgcctcccttacacctcccccgtgccccaggtgttgggcgcctggtgcccctgtgc caggagggcgtggcaggggcggtgcggggtcagcagctgtcagaggtgtggacggtgggc tatgccctggacctgctgctacaaggggggctgctgccggaggccacctggctggctcat cgtctgggggactggaagactgcagtctccctgggcctggcttacaccacctactccaca gagcactgcgacttcaccgggctcaggtggcgagaactacatctctcagcagcccttgag cctgtgagcctctttcaaggtcagctagagtctctactgggcaggaaggccaggtcagag gagacccaaggagacgaggagaactacaagagcttcacagactctctggagggtgaggay gtggagttgttgcagggttcagtgcaggagatcctgaaggcrtcagtcatggctggggta gatgtgttgtcccagcccctgggtgctctactggactcagccaaagacctgtcctcctgc cttcctgctctggtgcctatgggcctgtacctgcctgcaccgccactctactgcccccag cctgcacccaacacacaggacccgtcaggggggtttgggcagctgttggagggggcgtcc cgtcacagggtgtcaggggtcctmcagagggtgctgctgctcctgaggtctgcccgctgc tcccgtccagctgcccagtggtacatcagccacctgcgacgctcccgacatcgcctagac aaggatagcaggggggaagaggagctagggggaaaacggaagaggggcaagaggactgga acgggtaagaacaggatagcagggggggaagaggtggagacaggggtaagaacacggata gcagggggggaagagggctggagaacagcccggggtaaaaacagggatcagacaggcggg gagaggctggagaaggcaggtaagaacaggatacgccaggcggggaagatgggctggaga cagggggtaaaatcaggaatagcaggtggcgaagatgggctggcactacagggggcgaga aacttagtctgcttcagggagctgtgtggcctgtgttggatgctgaatgtcagagaccag ctctcaatgtcttgcaggaagtatcaggctgcaaggaaccatgggagagatccccaggtc ccagcagatgacagcgaggtgaccgcagcctgcgaggaggctctccactgggcctgtcgt ttccttcccttctcccgattcctcaatgctgaggagatcatccaggacaccctcctcagc ttggtctctgaactaccccctgtaaccctggtggcagagactctggtgcaggccttccct gaggaggaggagtcagtcagggtccctctgagagagaagtacaactcmctcctgcggaga ctgaggcactgcactgtcccagcctcaggacagaacggtaacaagagrgatgaggaggag ggagaggaggtgatgatgattctggtgcaggagcggctcagacagaggaggaaggacctg aagcgtctggccaggcacctggctcccctggagctctacctatgggagagggaggaggag caggacaggaggggaggagggcagggggctgtagccctgctagagagattctccctgggg gccagtctgagtaacagcaccctgacggactgtgggcgccccctggtgtacagcgatgga gacacggccgagaactccgtggctctctctcctgacctgcacagcaggcctcctcacagc atcagcaagagagtgagggtgcaggaccgagcagacaagcctggaagtcaagtagaagta gttgagggtgggagcatccaggaggaagaccagagctgcacrggcccagcccaggaccct gctgtgggggaggacagcccctctctgaccctgcccgtggtggggacctgggagtttgag ctggaggatgaggagtacctgcgtttcctggagctcttcctcagctacgtgttggagaag gacggccctgacccagacgcaggcagtgaccctcccctgctgaagggcttctgtagccag ctgagagagcgagagctgcactccctcaccttcgatgtcctcaccaccctccgccgtcgc cagagagatgggcgccaagcgaccaggaggcaggggggcagtgacgyccccgtgttcaga gcaggacactgctacaaaccagtactccttaccaccccttcgtttctccacagtgagccc cctacacccagacccagcatgtctgtcagtgtcctgtcycttcctgggctcaggaccggc agggagcaggggttgtttggcttcagtctgcaggccaggccagccagcccacgtccagaa cccacacctcaaagaagccgcctcggctcgaagtctagccccagtcagagttctgttccc tgggagcaaccatcggagggctgggcgttcgggcccctgtgctccgtggaggctgtagaa ctgcagcaggagctggagcccaagctggaggcccagttcccagggctgggcaggcttctg gagtggatggtgcgctgggctgataagaaggtgttgctgggacaacccagccggatgaag gagagggaggcgggtggaggagaggtagctggaggtggggtggttattcgggtcaaagcc tcggctcctgcggtgctcacggccctcagcatgttggagcacaggtacaccacygccctg ctaggcatggaccactacagcgcaaatttacaggttccagagaggcagtggacagtggct ccagtgttgcagcctgaggtgggctggaagctggagagggagagcagtgtggatacaggt taccctgcatcagctggcacacccattactctgccagaccaggatccccaacactgcgaa ctgtcctatgggtcacagactgagggggtggaacgagtgacatcccaagagacctcacag ctttctgaccctgtgggagtgaccttaataaaccctgagagtggggtggcagacttccca gacaacaagcttgacctttctgctgaaaaaggagaggacagcaatgctgacgaggccttg aggtcatcagcctctctcgccatccccaacatctctgtccacatcaagagcctccgtcca acacagagcccaccaggccaggcattaacgctggcagatctacggtgctcagagagggaa gaggacattgtcagctctcaagaggaggaagagaatctgctgtctcatggctccctgaga agaccatcagatattactgaagaagtgacaagaaatataactccgagtgagggttcagta tcagacgtccctccccgtgccagcttccaacaccttcccgtggcagagcctcaggctggg gctcaggcagcagactctgcccctaacggcgggctgccccaggggagcaccaatacgacc cctgcctctgctcccatccagaccctgcctgcccagacagaccctgtcagacagctcttg caggatgagctattcagactggtccagttgcagcagatcaacttcatgagtttgatgcag gtggtcggagcgtcgtttgtcaacctcccagtgtcacagaacaacacactcccggcccag tccaatgtgccctatccacaccccaatgcgcccctgtcccaccctaacactctcctccct cacctgaatctgaccccctcccagaacaacatgtcccctatgccccagacccagagctcg gttcaggcctcggagcccccgtctgggggagacagacccacagaccaaccccccatccac gaaatgcagccattggccgtccaccctgagccgttgagagatatccagggggagaccagg acgttgatctcatcctctcatgggcttcagaccactgtggaccccacctgcagtgcccct ctgctactgccctctggtggtagctcacaggttcctgctccctacagctcaggactgaag ctccttcagctgcaccctcccctgctgtccctccagcggcatggtaacacggcccctgtg cgtgaggcctggggacccccgtctgagaggagacccagcactactgtgcccccccacctg aaccccagccagtatgacccagccgctctgaggagggcagaggagagaacgagggaggca gagagagagtccaccgcgccaccatcacacctcaatctgacacagtatgcccactatccc tccaaccaggcccccaggaacacactgcccccgctccagaatccagagaccagggtggag aggtccagaggggctgagccccctcacctccctcctaccctcccatcacacagacctccc cctgtccacggcctccccctcctccgcttccaccctgacccacgcccccctacgaccttc gccctcatacccttcccacactcctccagacccctgactgtcaccccagcagccacgggc cacaaccccagactacagttactccagagagacccagaccctcctaggatgatgctgccc gaagccacccctccggcccgcgtgccacgtctcatccctctgggagagctgatgggctgg gctgcagggagacagaggggggcagaggccagactccaactcctcagagtggccccaccg gcacagaaccctaccccagcaacaccctccaccagcaccaactccagcaggaggcagaag agacaagtggagaggttgaagagagagggagagaaagcagaggtcacatttagaccagag gactccatcatactcccgcgagagcgcaatgaggacgagcctgcagagcctgttcttggg gagggctatgtctttcctcttgggacctttgactccgtgctgactggtcagggattggtg gacagggcactgtctactgcagctgagctccatgcctttgcctctacacacaagaggcct cctgagagccacgatgcttgtaccaacacagacccagcttctcctcactcagatacaggc atttctgcccaacctactgtcacttctgctgcttctggacctgctgctctccctcctgaa ttgttcctgaatctgcggttccctagagaccctcctgtccacgacacagagacatcgggg gagaaacgaccagagagaaacacgggtcgtcagttcataaatgtgatagatctggaggat ggggctctgctacaggagttgacatcgtgcccccgccctgcggtgcgggatcataacgtc aacccctctcagccctctccccccacctcrgcacagctccacctgctggcagcctccgtc accaactcagccccttcggaactcactgcagacaccagcacagaggacgaccaaccccaa gctcagccagatggcttctctgtagcgtcccttccacctgcccaccctgagcccagtgga gacccagtgactcgcagtctgctgcaggagaggagagccccaggccgctccctggagacc catcgcggagctccatccagggccccagtgatccaggcgtctgcccgtctgtctgagatg gacgcccagctagctgccttgcagaayattgcagatcacatggagagcgagtttgccaat accagactgytggtgagcaccattgagactctgggtcctgccatggctcctgaaagggtg gagggaagaacaccagtgaacaagacagtcactctggccacctcaccagaagggtggaga tcacatctgtccgtgcaccatgaccttgagctagcgggtcttcgacaggaagaggaggag gaggaggaaggacctgatagtgtcgtagtcagctctgctccttggggwgtgaaacagccc ttctctctttctmctcacactcctgccrtccagagcacctcgaccctgcaccagcccaca ccaacaggcctgtggttgtctcccgtcagaccagaaccagagcagcgtgtgtgggacatg ggtcaagatttgacagacactatggatggagcacctgggaaatgggcagaggagactctg ggtctcagtgggctgagtgatgtggcagacatcttggcggagttggtgagggagggaggc atctcccccacggcactgggactgtcgcacacccaagctgcccgcctcaacagcaggctg gaccagcaacagagcggcagggcgggacagaggggcatgcgagcagaggaggagaggcga gagctgagggtttggatgagaaggaaacagagggagaaactggttgagtaccgcagacag agggaggagaagagggagagggaacgcaaacccttctcggccccagtcacactgaaacca acgtccaaagatataaacatcaataagaaaatcaaggaagagaaagacaaracggttctg ctggagcaccacaatcagcgggcccgcgatgcctgtagtctgatcacagacctcctcacc accccactgaccctgcccaataacgccaaccgcaccctgaacctacccgccacctccaca cgaccccttacagctcagactgtcggcagcacccgcagcagccccagaggtcgtagtctg tctgttggggggaggaggaggacaagtaccaaaccccagactgggagagcccgctccctc tcctctccaggggtgacaccacgttcagaaagacggcctgcgtcgtcaggggggcaggag acactgacttccagattgggactgcacagaccagcgagttttctgccaggggaccgcctc tcccaggtgacccggcggggtatgatcacagacctgaggggyaggactgggactgggcct aagacacccagccagcaagagtggagaagagaagtgatccagtcgtcacctggacggaga ggtggaggaacaagggagcagagagagactgaagagagggaggaggaggtggtgagccca tggaacccccctccagagatctgcaggttgctggggctggagaactcagacggccagggt ggtgtggtggctagagctgggggaacagggctggacagactggataccctgtcagagagc actggcagcatcctcagcaaactggactgggctgccattgaaagcattgtggcctcggaa ggggccatctga

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