Salvelinus sp. IW2-2015 (Arctic char): 111964258
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Entry
111964258 CDS
T05762
Name
(RefSeq) transforming growth factor beta-1 isoform X1
KO
K13375
transforming growth factor beta-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04060
Cytokine-cytokine receptor interaction
salp04068
FoxO signaling pathway
salp04110
Cell cycle
salp04148
Efferocytosis
salp04218
Cellular senescence
salp04350
TGF-beta signaling pathway
salp04518
Integrin signaling
salp04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111964258
04350 TGF-beta signaling pathway
111964258
04068 FoxO signaling pathway
111964258
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111964258
04518 Integrin signaling
111964258
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111964258
09143 Cell growth and death
04110 Cell cycle
111964258
04218 Cellular senescence
111964258
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
111964258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
salp03110
]
111964258
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111964258
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111964258
Chaperones and folding catalysts [BR:
salp03110
]
Intramolecular chaperones
Others
111964258
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Transforming growth factors (RSTK binding)
111964258
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Growth factors/receptors
111964258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
111964258
NCBI-ProteinID:
XP_023843848
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All DBs
Position
LG5:30039301..30044318
Genome browser
AA seq
389 aa
AA seq
DB search
MRAVCLMLTALLMLEYVCRSDTMSTCKSLDLELVKRKRIEAIRGQIXSKLRLPKEPEIDQ
EGDTEEVPASLMSIYNSTVELSEEQVHTYIPPNPDAEEEAYFAKEVHKFNMKQSENTSKH
QMLFNMSEMRSVLGTDRLLSQAELRLLIKNRGMTDGIEQRLELYRGVGDKARYLKSHFVS
KEWANRWVSFDVTQTLNEWLQGAVFVQHFTGEEQGFQLKLPCDCGKTMEEFLFEISGMNK
LRGDTETLAMKMPSKPHILLMSXPVERHSQLSSRKKRQTTTEEICSDKSESCCVRRLYID
FRKDLGWKWIHEPTGYFAKYCIGPCTYIWNTENKYSQVLALYKHHNPGASAQPCCVPQVL
EPLPIIYYVGRQHKVEQLSNMIVKSCKCS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagggcagtgtgtttgatgctgactgccttattgatgttggaatatgtgtgccggagt
gacaccatgtccacctgtaagtctctggacttggagctggtgaagaggaaacgtattgag
gccatccgtggacagatartgagcaagctgcggctgcccaaggagccagagattgaccag
gagggagacactgaggaggtcccagcttccctgatgtccatctacaacagcacagtggag
ctgagtgaggagcaggtgcacacgtacataccgcctaatccggatgcagaggaggaggca
tactttgcaaaggaggtccacaagttcaacatgaaacaaagtgagaacaccagtaagcac
cagatgctcttcaacatgtctgagatgcggtcagtactggggactgatcgactgctctct
caagctgagctccgtctcctcatcaagaaccgtggcatgaccgatggcattgagcagagg
ctggaactctacagaggagttggagataaggcacgttacctgaagtcccattttgtctcc
aaggaatgggccaatcgctgggtgtcctttgatgttacacagactctgaatgagtggctg
caaggggctgtatttgtgcaacacttcacaggagaggagcagggattccaattgaagttg
ccttgtgattgtgggaaaacaatggaggaattcctcttcgaaatatcagggatgaacaag
ctgaggggagatacagaaacactagccatgaaaatgccatcaaagcctcacattttactg
atgtcakttcctgtggaacgccacagccagcttagctctcggaagaaacgacaaaccact
actgaagagatctgctcagataaatcggagagttgctgtgtgcgaagactttacattgac
ttccgtaaggacctgggctggaagtggatccatgaacccacgggctattttgctaartac
tgcatcggcccctgcacctatatatggaacacagaaaacaagtattcccaggtactggct
ctgtataagcaccacaaccccggagcctctgcccaaccctgctgtgttccacaggtcttg
gagcccctacccattatctattatgtggggagacaacacaaggtggagcagttgtccaat
atgattgttaagtcctgcaagtgtagctag
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