KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111965161
Entry
111965161         CDS       T05762                                 
Name
(RefSeq) tumor necrosis factor
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010  MAPK signaling pathway
salp04060  Cytokine-cytokine receptor interaction
salp04150  mTOR signaling pathway
salp04210  Apoptosis
salp04217  Necroptosis
salp04350  TGF-beta signaling pathway
salp04620  Toll-like receptor signaling pathway
salp04621  NOD-like receptor signaling pathway
salp04622  RIG-I-like receptor signaling pathway
salp04625  C-type lectin receptor signaling pathway
salp04920  Adipocytokine signaling pathway
salp05132  Salmonella infection
salp05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:salp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    111965161
   04350 TGF-beta signaling pathway
    111965161
   04150 mTOR signaling pathway
    111965161
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    111965161
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    111965161
   04217 Necroptosis
    111965161
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    111965161
   04621 NOD-like receptor signaling pathway
    111965161
   04622 RIG-I-like receptor signaling pathway
    111965161
   04625 C-type lectin receptor signaling pathway
    111965161
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    111965161
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    111965161
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111965161
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:salp04052]
    111965161
   00536 Glycosaminoglycan binding proteins [BR:salp00536]
    111965161
Cytokines and neuropeptides [BR:salp04052]
 Cytokines
  Tumor necrosis fators
   111965161
Glycosaminoglycan binding proteins [BR:salp00536]
 Heparan sulfate / Heparin
  Cytokines
   111965161
SSDB
Motif
Pfam: TNF Mobilization_B
Other DBs
NCBI-GeneID: 111965161
NCBI-ProteinID: XP_023844956
LinkDB
Position
LG6.1:14699157..14701059
AA seq 246 aa
MEGYAMTPGDMERGPVYNTTVTAVAEKKASRGWLWRLCGVLLIAALCAAAALLFAWFQHG
RLATMQNEMEPQLEILIGAKDTHHTLKQIAGNAKAAIHLEGEYNPNLTADTVQWRKDDGQ
AFSQGGFELQGNQILIPHTGLFFVYSQASFRVKCNGPGEHTTPLSHVIWRYSDSIGVNAN
LLSGVRSVCQRNYGDAESNNGEGWYNAVYLGAVFQLNEGDKLWTETNRLTDVEPEQGKNF
FGVFAL
NT seq 741 nt   +upstreamnt  +downstreamnt
atggaggggtatgcgatgacacctggagacatggagaggggccctgtgtacaacacaacg
gtgacagctgttgctgagaaaaaggcctccagaggttggctatggaggctttgtggggtc
ctcttaatagcagctttatgtgcggcagcagccctgctctttgcctggtttcagcatgga
agactggcaacgatgcagaacgaaatggagcctcaactggagatactcattggtgcaaaa
gatacccaccatacattgaagcagattgccggcaatgcaaaagcagccatccatttagag
ggtgaatacaatcctaatcttaccgctgacaccgtgcagtggagaaaggatgacggccag
gctttttcccagggtgggttcgagctacaggggaaccaaatcctcatcccacacactggg
ctcttcttcgtttacagccaggcttcgtttagggtcaagtgcaatggcccgggcgagcat
accactcctctgagtcacgttatttggcgctattcggactccatcggggttaatgctaat
cttcttagcggggtaaggtcagtttgtcaacgaaactacggtgatgctgagtccaataac
ggcgaaggctggtacaatgcagtttaccttggtgcagtgtttcagctgaatgaaggggac
aaactgtggactgagaccaatcgactgaccgacgtggagccagagcagggcaagaacttt
tttggtgtgtttgcactatga

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