Salvelinus sp. IW2-2015 (Arctic char): 111965161
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Entry
111965161 CDS
T05762
Name
(RefSeq) tumor necrosis factor
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04060
Cytokine-cytokine receptor interaction
salp04150
mTOR signaling pathway
salp04210
Apoptosis
salp04217
Necroptosis
salp04350
TGF-beta signaling pathway
salp04620
Toll-like receptor signaling pathway
salp04621
NOD-like receptor signaling pathway
salp04622
RIG-I-like receptor signaling pathway
salp04625
C-type lectin receptor signaling pathway
salp04920
Adipocytokine signaling pathway
salp05132
Salmonella infection
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111965161
04350 TGF-beta signaling pathway
111965161
04150 mTOR signaling pathway
111965161
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111965161
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111965161
04217 Necroptosis
111965161
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111965161
04621 NOD-like receptor signaling pathway
111965161
04622 RIG-I-like receptor signaling pathway
111965161
04625 C-type lectin receptor signaling pathway
111965161
09152 Endocrine system
04920 Adipocytokine signaling pathway
111965161
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111965161
09171 Infectious disease: bacterial
05132 Salmonella infection
111965161
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111965161
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111965161
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Tumor necrosis fators
111965161
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Cytokines
111965161
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Mobilization_B
Motif
Other DBs
NCBI-GeneID:
111965161
NCBI-ProteinID:
XP_023844956
LinkDB
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Position
LG6.1:14699157..14701059
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AA seq
246 aa
AA seq
DB search
MEGYAMTPGDMERGPVYNTTVTAVAEKKASRGWLWRLCGVLLIAALCAAAALLFAWFQHG
RLATMQNEMEPQLEILIGAKDTHHTLKQIAGNAKAAIHLEGEYNPNLTADTVQWRKDDGQ
AFSQGGFELQGNQILIPHTGLFFVYSQASFRVKCNGPGEHTTPLSHVIWRYSDSIGVNAN
LLSGVRSVCQRNYGDAESNNGEGWYNAVYLGAVFQLNEGDKLWTETNRLTDVEPEQGKNF
FGVFAL
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggaggggtatgcgatgacacctggagacatggagaggggccctgtgtacaacacaacg
gtgacagctgttgctgagaaaaaggcctccagaggttggctatggaggctttgtggggtc
ctcttaatagcagctttatgtgcggcagcagccctgctctttgcctggtttcagcatgga
agactggcaacgatgcagaacgaaatggagcctcaactggagatactcattggtgcaaaa
gatacccaccatacattgaagcagattgccggcaatgcaaaagcagccatccatttagag
ggtgaatacaatcctaatcttaccgctgacaccgtgcagtggagaaaggatgacggccag
gctttttcccagggtgggttcgagctacaggggaaccaaatcctcatcccacacactggg
ctcttcttcgtttacagccaggcttcgtttagggtcaagtgcaatggcccgggcgagcat
accactcctctgagtcacgttatttggcgctattcggactccatcggggttaatgctaat
cttcttagcggggtaaggtcagtttgtcaacgaaactacggtgatgctgagtccaataac
ggcgaaggctggtacaatgcagtttaccttggtgcagtgtttcagctgaatgaaggggac
aaactgtggactgagaccaatcgactgaccgacgtggagccagagcagggcaagaacttt
tttggtgtgtttgcactatga
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