Salvelinus sp. IW2-2015 (Arctic char): 111965301
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Entry
111965301 CDS
T05762
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10270
F-box and leucine-rich repeat protein 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111965301
03029 Mitochondrial biogenesis [BR:
salp03029
]
111965301
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111965301
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
111965301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
F-box_4
LRR_8
LRR_14
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
111965301
NCBI-ProteinID:
XP_023845157
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Position
LG6.1:20944831..20964789
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AA seq
613 aa
AA seq
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MLTLLSMFYYICLRRRSRSGTRGEALTSRRAVESGQRATLPISVEVEQYAKEVLDFSSHY
GSENSMSYTMWNLAGMPNVYPSSGDFTQTAVFRAYGTWWEQCASAPLPFRRTPKAFHSQD
YIELAFEEPVYPTAVEVLETYHPGAIVQIMACSLNPFSQNPPTDVRWEVLWAEEPTKMLT
PQARQFSPGIKQLSFPTNLIRVEVNSSLLKYYTELDAVVLRGQKERPILSLYKMPRIDIC
DLSDSDEELSDPGASSRQAGDGKHINLGNGYFDKLPYELIQLIVSHLTLPDLCRLTQTCK
LLHQHCCDPLQYIQLSLQPYWARLSDTSLGHLQGRCTLLQRLNLSWTGNRGALTLTGFSS
FMKACGGSLVCLELSCCHFLSEPCLEVISQTCPGLQELNLSSCDRLHPQAFTHISKLTQL
RRLVLYRTKIEQTAMLSILTFCIELRHLNLGSCVMIDDYDVVASMLAVRCRSLRSLDLWR
CRNLTERGLAELAAGCRLLEELDLGWCSTLQSSSGCFQHLARNLPCLRKLFLTANRTVCD
SDIEELAANCPALQHLDILGTRMVSSSSLRKLLQACPKLLLLDVSFCSQVDARIVQELCG
LFPNVAIKKSFTQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgctaacccttctgagcatgttttactatatctgtctgcggcgccggtccaggagcgga
actcggggtgaggcgctgaccagcaggcgggctgtggagtcaggccagcgggccaccctg
cccatcagcgtggaggtggaacagtatgccaaagaggtgctggacttcagctcccactac
ggcagtgagaacagcatgtcgtacaccatgtggaacctggccggcatgcccaacgtctac
cccagctctggggacttcacccagacggccgtgttcagggcctacgggacgtggtgggag
cagtgtgccagcgcgcctctgcccttccgccgcacgcccaaggccttccatagccaggac
tacatcgagctggcctttgaggagcccgtctaccccacagctgtggaggtgctggagacc
taccacccgggggccattgtccagatcatggcctgctccctcaaccccttctctcagaac
cctcccacagacgtcaggtgggaggtgttgtgggctgaggagcccaccaagatgctgacc
ccccaggccaggcagttctcccccggcatcaaacagctgagcttccccaccaacttgatc
cgcgtggaggtcaacagctccctgctaaagtactacacggagctggacgccgtcgtcctg
cgcggccagaaagagaggcccatcctctccctttataagatgcccaggatcgacatctgt
gacctgagtgacagtgatgaggagctgtctgacccgggagcctcctccagacaggccggg
gatggcaagcacattaacctggggaatggatacttcgataaactgccctacgagttgatc
cagctgatagtcagccacctgaccctgcccgacctgtgtcgcctgacccagacctgtaag
ctactccaccagcactgctgtgaccccctccagtacatccagctgagcttgcagccatac
tgggctcgcctcagtgacacctccctgggccacctgcagggccgctgcaccctgctccag
agactcaacctctcctggaccggcaaccgcggagccctcaccctcactggcttcagcagc
ttcatgaaggcatgtggcgggagcctggtgtgtctggagctgtcgtgttgtcacttcctg
agtgaaccgtgtctggaggtcatctcccagacgtgtcccgggctgcaggagctcaacctg
tcctcgtgcgaccgcctccacccccaggcctttacacacatctccaagctcacccaactg
cgccggctagtgctctaccgcacaaagatagagcaaacagccatgttgagcatcctaacg
ttctgcattgagctgagacacctcaacctggggagctgtgtgatgatagacgactatgac
gtggtggccagcatgctggctgtccgctgccgctcactgcgctccctggacttgtggcgc
tgcagaaacctgacagagcgtggcctggccgagctggctgcagggtgcagactactggag
gagctggacctgggctggtgctccacactgcagagcagctcgggctgcttccagcacctg
gcccgcaacctgccgtgcctgaggaagctcttcctcaccgccaaccgcaccgtgtgcgac
tcggacattgaggaactggctgccaactgccccgcactacagcacctcgacatactgggc
acccgaatggtaagctcctcttccctgaggaagctgctgcaggcgtgtcctaagctcctc
ctcctggacgtgtccttctgctcgcaggtggacgcccgcatcgtccaagagctctgcgga
ctcttccccaacgtggccatcaagaagagctttacccagtga
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