Salvelinus sp. IW2-2015 (Arctic char): 111965561
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Entry
111965561 CDS
T05762
Name
(RefSeq) RING-box protein 1-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03420
Nucleotide excision repair
salp04110
Cell cycle
salp04114
Oocyte meiosis
salp04120
Ubiquitin mediated proteolysis
salp04141
Protein processing in endoplasmic reticulum
salp04310
Wnt signaling pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111965561
04120 Ubiquitin mediated proteolysis
111965561
09124 Replication and repair
03420 Nucleotide excision repair
111965561
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111965561
04350 TGF-beta signaling pathway
111965561
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111965561
04114 Oocyte meiosis
111965561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111965561
03400 DNA repair and recombination proteins [BR:
salp03400
]
111965561
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
111965561
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
111965561
Multi subunit type E3
SCF complex
Ring finger protein
111965561
Cul2 complex
111965561
Cul3 complex
111965561
Cul4 complex
111965561
Cul7 complex
111965561
Cul8 complex
111965561
Cul9 complex
111965561
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111965561
TCR (transcription coupled repair) factors
Cul4-CSA complex
111965561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-RING_11
SCIFF
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
111965561
NCBI-ProteinID:
XP_023845487
LinkDB
All DBs
Position
LG6.2:12351644..12352069
Genome browser
AA seq
94 aa
AA seq
DB search
MDRMAAVMDVDTPSAMNSGASNKRFEVKKWNEVVLWAWDIVVDNCAICSNHMRDLCIECQ
ANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atggatagaatggcggcagtaatggatgttgataccccaagcgccatgaatagtggagca
agcaacaaacgttttgaagtgaagaagtggaatgaagtggtactttgggcctgggacatt
gtggtggacaactgtgccatctgtagcaatcacatgagggatctctgcatagagtgccag
gctaaccaggcctctgccacgtcagaggagtgcaccgtagcctggggagtctgcaatcat
gcattccatttccactgtatctcccgttggttgaagaccaggtag
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