Salvelinus sp. IW2-2015 (Arctic char): 111965680
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Entry
111965680 CDS
T05762
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04010
MAPK signaling pathway
salp04020
Calcium signaling pathway
salp04510
Focal adhesion
salp04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111965680
04020 Calcium signaling pathway
111965680
09133 Signaling molecules and interaction
04518 Integrin signaling
111965680
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111965680
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
salp01001
]
111965680
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
111965680
Protein kinases [BR:
salp01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
111965680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_VEGFR-1-like_5th
Ig_3
I-set
VEGFR1-3_N_Ig-like
Pkinase
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
VEGFR-2_TMD
Ig_PDGFR_d4
F22D3_4_N
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
111965680
NCBI-ProteinID:
XP_023845661
LinkDB
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Position
LG6.2:3148663..3222908
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AA seq
1233 aa
AA seq
DB search
MAPLDCAKLSILLHLITYITGQVSLPAPLLLPSGDTHLRHTGKSLTLTCRGAAQLHWRLP
WRXVTSEGVRVEECEPRVHAHCSKLLVSHLSPNDTGLYSCRYTQPSAGFSSTYIYVKDHQ
HPFVEHHFPIPDTLFTYRHEATLVIPCRTTSPDQIVTLEGLPPLSEEIEQLKKWDPKIGF
VMPYGPYKSFSLLTCVTSVNGQQVQSQYIPLRQTNVLRNVKINPERIXLLVGDTLVLNCS
AETTFNGRINFQWEYPKRMVNRNPTVNKIRENPALITRMYKAITFSNITMDDRGTYMCTA
EIGNVEMGKKEHASAKVTIYEHPYLNVSYKNEWDRIVYTEGRNKLMFEPKVNALPPTDTI
TWYKDGVPINEKSTCYESSGYNLLIKDVKQKDAGVFTIALGNKERGLYRNLSYTLVVLVR
PMISEEEVASVDVQPYMFGKQHQLTCTAFGVPMPDITWLWQPCHPDPTDKECTLYTEPIP
VQMDDKGNYSHNWIESINNQTELVKGKNKTVSTLVVGAANVTGIYSCAAQNKLGTRTLRT
PFYVDDHPQHLAIDPQTAIEGDNVTLTCRGTRYLYTDLQWKDPQNSTITNNVTALQFSPY
SISLSLSLHNVSRNHTAGYQCWAHKIHNKRVIVKTVLTVHERKRPWLRQNLTNQDINSSS
TLTMACYALGVPPPYITWYKDNLPVQEGPGITLREDGVLTIKRVKKDDEGLYECLASNGE
GSVKASAVVTVVGDEGKPNIEVIVLVCTGVLHLLWLMLILFIRKLRKSVDYKMGPSIIID
PDEFPLDEQCELLQYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKTVAV
KMLKGGATTNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMMIVEYCKYGNLSNY
LRSKRADFIVYKSQDGKLVTSGSGCDLSELIKRRLESVASTGSSASSGFVEDKSYCDSEE
EEEEPEDLYKRVLTMEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDF
GLARDIYKDPDYIRKGDSRLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGASPYP
GLHIDEEFCCRLKEGTRMRAPEYSSSEIYQTMLDCWQGESGDRPTFTELVERLGDLLQAS
VQQEGKHYIPIAALLSKEGDPSNTARSEETNXRPLSHRDSGSTWNIRPGSVKTFDEVTME
NSSNDNHEGGQSDSGMGLSSDDGNTLKRLESFA
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggccccgctcgactgcgcgaaactgtcaatcctccttcatttgatcacatatataacc
ggtcaggtcagcctgccggcccctcttctgcttccctctggggacacacaccttcgccac
actgggaagtcactcaccctcacctgcagaggtgccgcccaactgcactggaggctgccc
tggcgggasgtcacctcggagggggtgcgcgtggaggagtgtgagcctcgggtgcacgcc
cactgcagtaagttgctggtgagccacctgagccccaacgacacgggcctctacagctgc
aggtacacccagccctccgccggcttcagctccacctacatctacgtcaaagatcaccag
catccgtttgtggagcaccatttccccattccagacaccttgtttacatacagacatgag
gccacccttgtgattccctgtagaacaacttctcctgaccagattgtcactcttgaaggg
ctgccacccttatcagaggagatagaacaattgaagaaatgggaccccaaaataggcttt
gtgatgccatatggtccctacaaatcctttagtctcctgacctgtgtcaccagcgtcaat
ggccaacaggtccagtcgcagtacatccctctgaggcaaactaacgtcctaaggaacgta
aagatcaaccctgaacgtatcyagctgttagtgggagatactctggtcctcaactgctct
gcagagaccaccttcaacggaaggatcaacttccaatgggaatacccaaagaggatggtc
aatcggaaccccaccgtcaataagatcagagagaatccggctttgatcaccaggatgtac
aaagccatcaccttctccaacatcaccatggacgacaggggcacgtacatgtgcacggcg
gagatagggaacgttgagatgggaaaaaaggaacatgcctcagccaaggtcaccatctac
gaacatccatacctgaatgtgtcctataagaatgaatgggacaggatagtctacacagag
ggtagaaacaagctgatgtttgaacccaaggtcaatgcactgccaccaaccgacaccatc
acatggtataaggatggcgtccccatcaacgagaartccacttgttacgagtcttcaggc
tacaacctactcatcaaggacgtgaagcagaaggatgctggggtcttcaccatcgccctg
ggcaacaaggagagaggcctctacaggaatctcagctacactctggtagtcctagtgagg
cctatgatctcagaagaggaggtggcctcggtggacgtccaaccatacatgttcggcaag
cagcaccagctaacctgcaccgcctttggagtgcccatgcccgacatcacgtggctctgg
caaccatgccatcctgaccccaccgacaaagagtgcaccctttacactgagccaatccca
gttcaaatggatgataaagggaactactcacacaactggattgagagcataaacaaccaa
actgaactggtgaaaggaaagaacaagactgtgagtacactagtggtgggagcggctaac
gtcacagggatctactcctgcgcagcccagaacaaacttggcacccgtacactgagaacc
cccttctatgtggacgatcaccctcagcacctggccattgayccccagactgccatcgag
ggtgacaacgtcactctgacctgcagggggactcggtacctgtacacagacctgcagtgg
aaggaccctcagaactccaccatcaccaacaacgtcacggccctgcagttcagcccatac
tctatctctctctccctaagcctgcacaatgtgtccaggaatcacacagcaggctaccag
tgctgggcacacaagatccacaacaagagagttatagtcaagactgtgctgactgtgcat
gagaggaagaggccgtggctgagacagaacctgaccaatcaagatataaacagcagcagc
actctgactatggcctgctacgccctgggtgtgccgccaccctacatcacctggtacaaa
gacaacctaccagtacaggaaggtccaggtattaccctgagggaggatggggtgctgacg
atcaagagagtgaagaaagacgatgagggcttgtacgagtgtctggccagcaacggtgag
gggagtgtgaaagccagtgctgtggtcactgtcgtgggtgatgaggggaagcccaacatt
gaggtgatcgtcctggtgtgtacaggagtgctgcacctcctctggctcatgctcatcctc
ttcatccgcaagctgaggaagtctgtggactataagatgggtccatccatcatcatcgac
ccagacgagtttcctctggatgagcagtgtgaactcctgcagtatgacagcagcaagtgg
gagtttccccgagaccgcctcagactgggcaaaactctgggccatggagccttcgggaaa
gtggtggaggcttctgcttttgggatcgacaagctctcsacctgcaagactgtggctgtc
aaaatgctgaaaggaggagctacgacaaatgagcgcaaggctctgatgtccgagctgaag
atcctgatccacattggtcatcatctgaacgtggtcaacctgctgggagcctgcaccaag
cctggaggtccgttgatgatgatagtggagtactgcaaatatggaaacttgtcaaactac
ttgagaagcaagagggctgatttcatcgtctataagagtcaggacggtaagctggtgacg
tcggggtcgggctgtgacctcagcgagctcatcaagcggcgcctggagagcgtggcaagc
accggaagctcggccagctcrggctttgtggaagataagagctactgcgactcagaggaa
gaggaggaagagccagaggatctgtacaagagagtattgacaatggaagatttgatttgc
tacagtttccaagttgcaaaaggcatggagttcctggcttcacgcaagtgtattcatcgt
gacctggctgcaagaaacatcttactgtcggagaataatgttgtgaagatttgcgatttt
ggactggccagagacatctacaaagacccagactacattcgcaaaggagattccagactg
cccctcaagtggatggcgccagaggccatttttgacaagatctacaccactcagagcgat
gtgtggtcctttggagtcctaatgtgggagattttctctctgggtgcctctccatatcct
ggcttacacatcgacgaggagttctgctgccgactgaaggaagggaccaggatgagagct
ccggaatactcctcctctgagatataccagaccatgttggactgctggcagggcgagtca
ggagaccggccaaccttcactgagctggtggagagactaggagacctgctacaggccagt
gtacagcaggagggcaagcattacatccctatagcagccctgctgtccaaggagggagac
ccctccaacacggcccggtcagaggagaccaacarcaggccgctctctcaccgcgactca
gggagcacctggaacatccggccgggaagtgtgaagacctttgacgaggttaccatggag
aacagctctaacgacaaccatgaggggggacagtcggacagtgggatgggcctgtcgtct
gacgatgggaacacgctgaagcgcctggagtcttttgcctga
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integrated database retrieval system
