Salvelinus sp. IW2-2015 (Arctic char): 111965856
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Entry
111965856 CDS
T05762
Symbol
trpc3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111965856 (trpc3)
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111965856 (trpc3)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
111965856
NCBI-ProteinID:
XP_023846000
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All DBs
Position
LG6.2:complement(14282108..14323149)
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AA seq
920 aa
AA seq
DB search
MSTKGRKYHERVSFSEEEDEQCWKEENGCVDVHYLKSVQTIRDSSGYYAYNMKAAAELEL
PAHRRMTAAREKGRRPQMRGPAFMFNDRTTSMTAEEERFLDAAEYGNIPVVRKMLEDSTT
LNVNCVDYMGQNALQLAVGNEHLEVTELLLRRDNLARIGDALLLAISKGYVRIVETILAH
PSFQASERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILSAHCQKYEVVHMLLLKGARI
ERPHDYFCKCVECAEKQGKDAFSHSRSRINAYRGLASPAYLSLSSEDPVLTALELSNELT
KLANIEKEFKDKKSHKKETTQHNCFSLNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNG
DVTAEKESGQGLRSLLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAVKC
LVVVAVALGLPLLAVGYWFAPCSRLGNALRSPFMKFVAHAASFIIFLCLLLFNASDRFEG
ISIMPNVTVTDHPMQIYRVKTTEFSWTEILIMVWVTGMMWSECKELWTEGPREYIQQLWN
VLDFGMLSIFIAAFTARFFAFLQATRAQQYVNEKIHATDLSLVTLPPEVKYFTYARDKWL
PSDPQLISEGLYAIAVVLSFTRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLA
FMIGMFILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYNHKFIENIGYVL
YGIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLSYFDNGKTLPPPFSIV
PTPKSFYHLIRWIVGMLHCRRRSLKKDVELGMDSSKSRLNLFTQSNLRIAESHSFNSILN
QPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSRATEELS
FLIQKLSEKLKLGPTTRFYE
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgaagggcagaaagtatcacgagagagtatcgttctccgaagaggaggatgaa
cagtgttggaaagaggaaaacggctgtgtggatgtacattacctaaaatccgtccaaaca
attcgggattcgtctggatattatgcatataatatgaaagcggcggcggaacttgagctc
cccgcccaccggcggatgacagcggcgcgggagaagggtcgtcgaccgcagatgcgcggg
ccggccttcatgttcaacgaccgcaccaccagcatgaccgccgaggaagagcgctttctg
gatgcggcagagtatggcaacatccctgtggtccgcaagatgctggaggactctaccacg
ctcaatgtcaactgcgtggactacatgggccagaatgcattgcagctggcggtgggcaac
gagcacctggaggtgacggaactgctcctgcggagggataacctggcgcgcatcggtgac
gccctgctcctggctatctcaaaaggctatgtcaggatagtggaaaccatcttggcccat
ccatccttccaggctagcgagcgactgacacggagtccgtgcgagctgcaggacgacgac
ttctactcgtacgatgaggatggcacgcgcttctcgcccgacatcacccccatcattctg
tctgcgcactgccagaagtacgaggtggtgcacatgctgctgctgaagggcgcgcgcatc
gagcggccgcacgactacttctgcaagtgtgtagaatgtgccgagaaacagggcaaagac
gctttcagccactcacgctcacgcatcaatgcctaccggggcctggccagcccggcttac
ctgtcactgtctagcgaggacccagtgctcaccgcgttggagctcagcaacgaactgacc
aagttggccaacatcgagaaggagttcaaggataaaaagagccataaaaaagagaccacg
cagcacaattgcttctccctgaatgactatcgcaagctgtctatgcagtgtaaggacttt
gtagtgggagtgctggacctctgtcgggacacagaggaagtggaagccattttgaatgga
gatgttactgctgagaaggagtcggggcagggccttcgctctctcctgagcagggtcaaa
ctggccatcaagtacgaggtgaaaaagttcgtggcacaccccaactgccagcagcagctg
ctgacgatctggtatgagaacctgtcgggcctaagggagcagaccatcgctgtgaagtgc
ctggtggtggtggctgtggccctgggtctgcccctgctggctgtgggttactggtttgcc
ccttgcagtcggctgggcaatgctttgcgcagcccctttatgaagtttgtggcccatgcc
gcctccttcatcatcttcctgtgcctgctgttgttcaacgcatcggaccgcttcgagggc
atcagcatcatgccaaacgtgacagtcactgaccaccccatgcagatctaccgggtcaag
accactgaattcagctggactgagatcctcatcatggtctgggtcacagggatgatgtgg
tctgagtgtaaggaactgtggactgaggggccaagggagtacatccagcagctgtggaac
gttctggacttcggcatgctctcaatcttcatcgccgctttcactgcccggttcttcgcc
ttcctccaggccaccagagcccagcagtacgtcaacgaaaagatccacgctaccgatctc
tccctagtgaccctacccccagaggtcaaatacttcacctacgcgagggacaaatggctg
ccgtcagacccccagctgatctcagaaggactatacgccatcgccgtggtgctgagcttc
acacgcatcgcttacatcctgccggctaacgagagcttcggaccgctccaaatctccctg
ggccgcactgtcaaagacatcttcaagttcatggtcctgttcatcatggtcttcctggcg
ttcatgattggcatgtttatcctctattcttactacttgggtgccaaggtcaacccggca
ttcaccacggtggaggagagcttcaagactctgttctggtctatatttgggctgtcagag
gtgtcctccgtggtgctcaaatacaaccacaagttcattgagaacattggctacgtgctc
tacggaatctacaacgtgaccatggtggtggtgttgctcaacatgctgatcgccatgatc
aacagctcctatcaagagatcgaggatgacgcggatgtggagtggaagtttgcgcgctcc
aaactgtggctgtcctactttgacaacggcaagacgctgcctcctcccttcagcatcgtt
ccaactcccaagtccttctaccacctcatcaggtggatagttggcatgctgcattgccga
cgacgaagcctgaagaaggacgtagagctgggaatggacagttcgaagtccaggctcaat
ctcttcacccagtccaacctgcgcattgcagagtcccacagttttaacagcatcctgaac
caacccactcgctatcagcaaatcatgaaaagactcataaaacgctacgtgttgaaagca
caagtggacaaagaaaatgacgaggtcaatgaaggtgagctgaaagaaatcaagcaggac
atctccagtctacggtacgaactcctggaagacaagtctcgggctacagaggagctgtcc
tttcttatccagaaactgagtgagaaactgaagctaggccctacaacacgcttctacgag
tga
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