Salvelinus sp. IW2-2015 (Arctic char): 111965995
Help
Entry
111965995 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
salp04210
Apoptosis
salp04217
Necroptosis
salp04510
Focal adhesion
salp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111965995
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111965995
04217 Necroptosis
111965995
09144 Cellular community - eukaryotes
04510 Focal adhesion
111965995
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111965995
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
salp01002
]
111965995
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111965995
03029 Mitochondrial biogenesis [BR:
salp03029
]
111965995
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111965995
Peptidases and inhibitors [BR:
salp01002
]
Peptidase inhibitors
Family I32: IAP family
111965995
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111965995
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
111965995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
RNA_pol_N
Motif
Other DBs
NCBI-GeneID:
111965995
NCBI-ProteinID:
XP_023846206
LinkDB
All DBs
Position
LG6.2:22642726..22649608
Genome browser
AA seq
463 aa
AA seq
DB search
MSGPGRDSDMESDHAVDWSVMDMRLDSFRGSLLAQQVSAERLARAGFYFTGQADKVRCFS
CHKTVENWCGGDAPVERHAEVSPTCKFLSCTHRSRVNSLQGAMLTNETSYNEDAEDMEFR
LRTGEVVDDTTYPMAPHMVSEDSRFNTFGPWPSTSPVRPRELAQAGLFYLGEGDQVQCFC
CGRMLKGWEAGDTAWGEHSKHYPYCFFILGHDVGNLPSQGGREVEETRPRPQVPMQSFEE
RLGSFAGIQHPIDHERLARAGFYNTGAPDHVGCFRCGGGLKGWQQDEDPWEEHAKHYPGC
SFLLAEKGQEFVSSVQLQGPDWNNAASSHLNGCSSHETEVLQSANAQKAVEMGLEPALVE
RTIQERIRRDGTGYSTLETLLQDCFNRDPDSDAKTAENHDEDPLAKLRQLQREKQCKVCM
DRDICIVFIPCGHLVVCKECSEALDKCPICCRAITQKIKTYIS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggccccgggagagacagtgatatggagtcggaccacgcagtagactggtccgtg
atggacatgcggctggactcgttccggggttccctcctggcccagcaggtgtcagcggag
aggctggcccgcgctgggttttacttcacgggacaggccgacaaggtgcgctgcttcagc
tgccacaagactgtagagaactggtgtggaggtgacgcacccgtggagaggcacgcggag
gtctcccctacctgtaagttcctgagctgcacccatcgatccagggttaactctcttcaa
ggtgccatgctgaccaatgaaacctcctacaacgaagacgctgaggacatggagttccgc
ctgaggacgggagaggtggtagacgataccacctaccccatggccccgcacatggtcagc
gaagactcccggttcaacaccttcggcccgtggccctccacatccccggtccgacctaga
gagctggcccaggcggggctcttctatctgggggagggtgaccaggtgcagtgcttctgc
tgtggaaggatgctgaagggctgggaggctggggacacggcatggggagagcactccaaa
cactacccctactgcttcttcatcctggggcatgatgtggggaacctcccctctcagggg
gggagggaggtggaggagaccaggccacgtcctcaggtccccatgcagagctttgaggag
aggctaggcagctttgcaggaatccagcaccctattgaccacgagaggctggccagagca
ggcttctacaacacaggtgcaccagaccatgtggggtgtttccgctgtggtggaggtctg
aagggytggcagcaggatgaggatccctgggaggagcacgccaaacactatcctgggtgc
agttttctactggcagagaaaggacaggagttcgtcagcagcgttcagctacaaggtcct
gactggaacaatgctgcttcaagtcacctaaatggatgttcaagtcatgagacagaggtg
ctgcagtcagccaatgcccagaaggcggtggagatgggtctggagcctgccttggtagag
aggactatacaggagaggatacgcagggatgggacaggctactccaccctggaaactctg
ctgcaggactgctttaacagagaccctgacagtgacgcaaagacagcagagaaccatgac
gaggatccccttgcgaagctacggcagctgcagagggagaaacagtgcaaagtgtgtatg
gacagagacatctgcatcgtcttcatcccctgtgggcacctggtcgtctgcaaggagtgt
tccgaggcccttgacaagtgtcccatctgctgtagagccatcacacaaaagatcaagaca
tacatctcctaa
DBGET
integrated database retrieval system