Salvelinus sp. IW2-2015 (Arctic char): 111966201
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Entry
111966201 CDS
T05762
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111966201 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111966201 (nup210)
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111966201 (nup210)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_8th
Ig_NUP210_13th
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_9th
Ig_NUP210_5th
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_4th
Ig_NUP210_1st
Ig_NUP210_6th
Ig_NUP210_16th
Ig_NUP210_14th
NUP210_Ig
Big_2
Ig_Eae
AlphaC_N
Motif
Other DBs
NCBI-GeneID:
111966201
NCBI-ProteinID:
XP_023846423
LinkDB
All DBs
Position
LG7:2894315..2953862
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AA seq
1891 aa
AA seq
DB search
MAVFALSSLSVFLFLISSTIHTTCASKLNIPKVLLPLARSTRINFTLEATEGCYRWSSTR
PEVASIEAVEVDVSRLCSQRAXLQARSTQPSRLTSIILAEDVVTGQVLRCDAIVDIISEI
QIVSTTRELHLEDSPLELKIHALDSEGNTFSTLASLVFDWTIVKDADMDGYLDSYNSLRV
LKFSESTYTPPGYISEMEKVGKQGDIILVSGLKTGHAKLKAKIQESLYKDVGAAEVKLLI
LENILLSPAHDVYLLVGTSIQYKVQKIRQGKITELSMPCDQYELHLKNSVAGPDGNQELA
VASLDQSTSTVNGLHLGQINVVLDHKSLRMQGVSRLPNGTLYVVEPGYLGFKINPGESWV
LETGRVYNILIEVFDKSSNRIYLSDNIRIEAAFPEEYFEILESSLNGSYHRVKALKNGLT
LIEAVLKSVVDQNGRIHELANTVHNEQDVEIYNPIVLSPSILTFPWQPKVGAYQYTIQAA
GGSGNFSWSSSNLAVATVTVKGVMTTVSDIGVSVVYAHDVRNPMHYGAMKVYVVEPVGMD
FSPCPVEARVGLVLELPLRIFGLLGEGGKWGVEQRVMLSDCSHFDLQVEEETQGVFQLLE
GRLAPGQDHCSGVRAQALAPGYTTLTVSYTHGNVHLSTKITIAAYPPLRAVDPASVALVT
LGSSKDMLFEGGPKPWVLEPSKFFRNLKAEDENSVSLALTGPTSRSYLRHWVRATCRALG
EQVLALTVGNQPSLTNPYPAVEPAVVMFVCAPPSRLTLVPVYTSPQLDLTCPLLQQNKQL
VPVSNYRNPVLDLAAFDQQGRKFDNFSSLSIVWESTKVSLASIEPTMPMELELLQDSNKQ
KKLHGRQTVLVHHQSGTAAITVTALSYQVPHLKAAKVLSPFDPLTPVSATLELLLVEDVT
VSPVAVTIYNHPDVRADLALREGSGYFFVNTSVGGIADVVYQEAQGSAEVHPVQPGTVQV
MVHDLCLAFPAPATATVHISDILEVYVRVVDKVEIGKSVKAHVRVLDDNKKPFLAKYFRF
LNLKLSAASGIISLQALSDPSEKDTAIFLVKGLAIGQTSVSAMLVDKTGRKIASAPQQIE
VFPPFKLIPRKMTLIIGAMMQITSEGGPQPQSNILFSMANEEMASVNDIGHVRGIAIGNV
TVTGLVQAVDAETGKLVVVSQDQVEVEVVQLRAIRIRAPITRMKTGTQMPVYVIGLTSSQ
TPFSFGNTLPGLTFHWSTTKRDILDLQSRHAEASFQLQSEHNFAMSVTGKTKGRTGLKVV
LKVNDPKAGQLERKLLELSDELQIQVYDKLHMLNPAVEAEEILMAPNSGLTLQTNRDGVV
ALSYRVLDCPNQATIVQVDEKGLLSSGSLTGSSSLLVTSQETFGVNQTLVLAVKVAPVSY
LRFSTSPVINNPSRDSLSAIPLGMVLTFTVHLHANTGEVLHSHNSLLTFTTNRDDLVQMG
RGPGNNTLTVRTVNVGLTLLAVWDEEQAGMADYLALPVQHAIHPEEATRLVVGDVVCFSA
QLLSPQGVPGTWSSSSTGVLQVDSKMGVAVARDAGTTTVYYEIPGLLKTYREVVVEGATR
TAVMAHPAAVRGDRDTRILLTTRETGTNLIGSCSAAQTASIALLHPETSVSCRLSFTSDA
VNFSAHDVYLTHISFDPSTGFYSCSLTLQSLSDQQTRVLSLSMTSLLVRAGVEGSAFSGE
QVSARLPVETGLYSDQTELLLSNLQPDAELTVYGPTAALGSLEVSSSSPSISIQEREVFH
GFPSYSKYTVSVVDPQAAASASVSITSSSTGQILVIPVTVIHVTDPSTTMQAAASVVAME
GTHFLQAFIDSYQMMFFTIFALLAGTAIIIIVCHALFSQRDLAPHPAFIQRTPSPSGFAS
PVSNSFTNNMTSPDTRSSHKLRLFSPDYNSR
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttttgcgttgagttcactatcagtgtttttgtttttgatatcaagtacaatt
cacaccacgtgtgcctcaaagttgaatatccccaaagttttattaccacttgcccgaagc
actagaataaatttcacgctggaggcaactgaaggctgttacagatggtcttccaccaga
ccygaggtggccagcatcgaggctgtggaagttgacgtcagcagactgtgttcccagaga
gccytcctccaggcccgctccacccagccttccagactcaccagcatcatactggctgag
gatgtcgtaacgggacaggtactgcgctgtgacgccatcgtggacatcatcagtgagatc
cagatagtgtccaccaccagagagctgcacctggaggactcgccactggaactgaagatc
cacgccctggactctgagggaaacaccttcagcaccctagcaagcctggtgtttgactgg
accatagtgaaagacgcagacatggatggataccttgactcctacaactcattaagggtt
cttaagttctctgagtctacgtacaccccccctggttacatctctgagatggagaaagtg
gggaaacagggagatatcatcttggtgtcaggactgaaaacgggccacgctaagctcaag
gccaaaatccaagaatctctctataaggatgtgggtgcagcagaggtgaaactgctgatt
ctggagaacatcctactgagccctgcacatgatgtctacctgctggtgggcacatccatc
caatacaaggtccagaagatcaggcagggaaagatcacagagttatccatgccctgtgac
cagtatgagctgcacctcaagaacagtgtggctgggcctgatggaaaccaagagctggcc
gtggctagtctggaccagagcacctccactgtcaatggcctgcacctgggacaaatcaac
gtggtgctggatcataagagccttcgcatgcaaggggtgtctcgtctgcccaacgggact
ctgtatgtggtggaaccaggctacttgggatttaagattaatcctggagagagctgggtc
ctggaaacaggacgagtgtataatatcctcatcgaagtgtttgacaagtcaagcaatagg
atttacttatctgataacattcggatcgaagctgccttcccagaggagtactttgagatt
ctggagtcctccctgaatggctcctaccaccgtgtcaaggctttgaaaaacgggctaaca
ctaattgaagctgtgctcaaatcggtggtggatcaaaatggaagaatccatgagctggcc
aacacagtccataatgaacaggatgtcgaaatctacaatcccatagtcctcagtcccagt
attctcacgtttccatggcagcctaaggttggagcctaccagtacacaatacaggcagca
ggaggcagtgggaatttcagctggtcctcctctaacctagccgttgccacagtgacagtc
aaaggagtgatgacgaccgtcagtgacatcggcgtcagtgtggtgtacgcccatgatgta
cgcaacccaatgcactatggcgcgatgaaggtgtatgtggtagagcccgtggggatggac
ttctctccctgcccggtggaggcacgtgtggggctggtgctggagctgcccctccggatc
tttggcttgctaggggaggggggaaagtggggagtggagcagcgggtgatgctgagcgac
tgcagtcactttgacctgcaggtggaggaggagacccagggagtgttccagctgctggag
ggtaggctggctccagggcaggatcactgcagtggggtacgggcccaggctcttgcccca
ggatacacaaccctgacggtcagctacacccacggcaacgtccacctcagcaccaagatc
accattgctgcctacccaccactcagagctgtggaccctgcctctgttgccttggtgacc
ctgggctcctctaaggacatgctttttgagggcgggcccaagccctgggtcctagaaccc
tccaagttcttccggaatctaaaggctgaggatgagaacagtgttagcctggctctgacc
gggcccacctcccgcagctacctccgacactgggtcagagccacctgtagagccctggga
gaacaggtattggcacttactgtggggaaccagcctagtctgaccaatccctatcctgcg
gtggagccagcagtggtgatgtttgtgtgcgcccctccctctcgcctcaccttggtccct
gtgtacacaagtccccaactggaccttacctgccctctgctgcagcagaacaaacaactg
gtgcctgtctcgaactaccgcaaccctgtgctggacctggctgcctttgaccagcaaggc
aggaagtttgacaacttcagctctctgagtatcgtctgggagtcgaccaaggtgtccctg
gccagtatcgaacccaccatgccaatggagctggaattactgcaggacagcaacaaacag
aagaaacttcatggtcgtcagacggtccttgtccaccaccagtctgggactgctgctatc
acagtaacagctctgagttaccaggtcccccacctcaaggctgctaaggtcctcagtccg
tttgaccctctgacccctgtctcagccactctggaactcctattggtggaagacgtaacc
gtcagtcctgtagctgtcaccatatacaaccaccctgacgtgcgggctgacctagccctg
agggagggctctgggtatttctttgtcaacaccagcgttggagggatagcagatgtggtg
taccaggaggcccagggatctgctgaggtgcatccagtccagccggggacagtgcaggtg
atggttcatgacctctgcctggccttcccagcccctgctacggctacggtccacatctcg
gacatcctggaggtttatgtccgagtggttgacaaggtggagattggtaaatctgtgaaa
gcccatgtcagggttctggatgacaacaagaagccctttttggccaaatatttccgcttt
ttgaatctgaaactcagtgcagcgtccggtatcatctctctgcaagcactttcagatccc
tccgagaaggacacggcaatcttcctggtcaaaggcttagcaattggacagacgagcgtg
tctgctatgctagtagacaaaactggaaggaagattgcatctgctccccagcaaatagag
gtgttcccaccattcaaactgatccccaggaaaatgactctgataatcggagccatgatg
cagatcacatccgagggcggcccacagccccagtccaacatcctcttctccatggccaat
gaggagatggcatctgtcaacgacataggtcatgtcaggggcattgccattggcaacgtc
acggttacaggactggttcaagctgtcgatgccgagactgggaagcttgttgttgtctct
caggatcaagtagaggttgaagttgtgcaattgagggccattcgcatccgggcccctatc
accagaatgaagactgggacacagatgcctgtgtatgtgatagggctcaccagcagtcag
acccccttctcctttggcaacaccctgcctggcctcaccttccattggtccaccaccaag
agagacatcctggacctccaatcacgacatgccgaggcctcttttcagctccagtcagag
cataactttgctatgagcgtaacaggaaagactaaaggaaggacagggctgaaggtggtg
ctcaaagtcaacgacccaaaggctggacaactggagaggaagctactagagctcagtgat
gaacttcagatccaggtttatgacaagctgcacatgcttaatccagctgtggaggcagag
gagatactgatggctcccaactctgggctcacactccagactaaccgggacggtgtggtt
gctctctcctaccgggtgctggactgtcccaaccaggctaccattgtccaggtggatgag
aagggcctcttgtcctctggctcgctcactggctcctcctccctgctggtgacctcacag
gaaaccttcggtgtcaatcaaaccctggtcctcgcagtgaaggtggccccagtgtcgtac
ctgcgtttcagcaccagtccagttatcaacaacccttccagggacagcctgtctgctatt
cctctgggcatggtgcttactttcactgttcacctccatgcgaacactggggaggtcctt
cacagccacaactccctgctcacgttcaccaccaacagggatgacctggtgcagatgggc
cggggcccgggtaacaacaccctgacggtgcggacagtcaacgtgggcctcaccctgctg
gcggtgtgggacgaggagcaggcaggcatggctgactacctggcgctgcccgttcagcac
gccatccaccccgaggaggccacgaggctggtggtgggagacgtggtctgcttcagcgcc
caactcctcagcccccaaggtgtcccgggtacctggagctcctcatccactggcgtgctg
caggtagactctaaaatgggcgtggccgtggcaagagacgcaggcaccaccactgtctac
tatgagatccctgggctgctgaagacctacagagaggtggtggtggagggggccaccagg
acagcggtgatggctcaccctgcagcggtgaggggggacagggacaccaggatactgctc
accaccagagagacgggaaccaacctcataggctcctgctccgctgcccagaccgcctcc
atcgccctgctgcacccagagacctccgtcagctgccgtctgagcttcaccagcgacgcc
gtcaacttctccgcccatgacgtctacctcacacacatcagcttcgaccccagcaccggc
ttctactcctgctctctgaccctgcagtctctgagtgaccagcagacacgggtgctgagc
ctgtccatgaccagcctgttggtgagggccggggtggagggcagtgccttctctggggag
caggtcagtgccaggctgcccgtggagacaggcctgtattctgaccagacagagctgctg
ctcagcaacctgcagcccgacgcagagctcactgtctacggccctaccgcagcactcggc
agcctggaggtgtcgtccagctctccytccatctcgatccaggagagagaagtgttccac
ggcttccccagttactctaagtacacggtcagtgtggtggacccccaggctgcagcctca
gcctccgtgtccataaccagctcatccactggccagatcctcgtcatcccagtcaccgtc
atccacgtgactgatcccagcaccacaatgcaagctgctgcttccgtggttgccatggag
ggaacccatttcctgcaggccttcatagactcttaccagatgatgttcttcaccatcttc
gcgctactggctggcaccgccatcatcatcatcgtgtgccatgcactgttctctcagagg
gacttagcgcctcacccagccttcattcagaggacaccgtccccttcaggttttgcctca
cccgtctcaaactccttcaccaacaacatgacctccccggacacaaggagcagccacaaa
ctacgactcttctccccagactacaactcccggtag
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