Salvelinus sp. IW2-2015 (Arctic char): 111967605
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Entry
111967605 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111967605
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111967605
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
111967605
NCBI-ProteinID:
XP_023848534
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Position
LG8:complement(22807136..22891512)
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AA seq
894 aa
AA seq
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MTGAREKGRRPAMRGPAFMFNDHTTSMTAEEERFLDAAEYGNIPVVRKMLEESTTLNVNC
VDYMGQNALQLAVGNEHLEVMELLLRRDNLARIGDALLLAISKGYVRIVEAILAHPSFQA
SERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLLKGARIERPHD
YFCKCPECTEKQGKDAFSHSRLRINAYRGLASPAYLSLSSEDPVLTALELSNELTKLADI
EKEFKDKKSHKKETMQHNCFSLNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVTAE
KEAGKGLRSLLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAVKCLVVVA
VAFGLPLLAMGYWFAPCSRLGNVLRSPFMKFVAHAASFIIFLCLLLFNASDRFEGISTMP
NVTVTDHPMQIYRVKTTEFSWTEILIMVWVTGMMWSECKELWTEGPREYMQQLWNVLDFG
MLSIFIAAFTARFFAFLQATRAQQYVNEKIHTTDLSLVTLPPEVKYFTYARDKWLPSDPQ
LISEGLYAIAVVLSFTRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGM
FILYSYYLGAKVNPAFTTMEESFKTLLWSIFGLSEVSSVVLKYNHKFIENIGYVLYGIYN
VTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLSYFDNGKTLPPPFSIVPTPKS
FYHHIRWIVGMLHCRQRSVKKDLEXGVGSSKSRLNLFTQSNLRIAESHSILNQPTCYQQI
MKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELSLLIQKLSD
KLKLGPTTRLPYKLTPPPPPPTVQEMQERRAYQSSQHPSISPHPPQQPTGQVVL
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgacaggggcgcgggagaagggtcgtcgaccagcyatgcgtgggccggccttcatgttc
aacgaccacaccaccagcatgaccgccgaggaggagcgctttctggacgccgccgagtac
ggcaacatccctgtggtccgcaagatgctggaggagtccaccacgctcaatgtcaactgt
gtggactacatgggccagaacgcattgcagcttgcggtgggcaacgagcatctggaggtg
atggaactgctcttgcggagggacaacctggcacgcatcggtgacgccttactcctggct
atctcgaaagggtatgtcaggatcgtggaagccatcttggcccatccatccttccaagcc
agcgagcggctgacgcggagtccgtgtgagctgcaggacgatgacttctactcgtatgac
gaggatggcacacgcttctcgcccgacatcacccccatcattctggctgcacactgccag
aagtacgaggtggtacacatgctgctgttgaagggcgcgcgcattgagcggccacatgac
tacttctgcaagtgcccagaatgcaccgagaaacagggcaaagacgccttcagccactca
cgtttgcgcatcaatgcctaccggggcctggctagcccggcttacctttcgctgtctagc
gaggacccggtgctcaccgcgctggagctcagcaatgaactgaccaagttggccgacatc
gagaaggagttcaaggataaaaagagccataaaaaagagaccatgcagcacaattgcttc
tccctgaatgactatcgcaagctgtctatgcagtgtaaggactttgtagtgggagtgctg
gacctctgtcgggacacggaggaagtggaagccattttgaatggagatgttactgctgag
aaggaggcggggaagggccttcgctctctcctgagcagggtcaaactggccatcaagtac
gaggtgaaaaagtttgtggcccaccccaactgccagcagcagctgctgacgatctggtat
gagaacctgtcgggcctgagggagcagaccatcgctgtgaagtgcctggtggtggtggcg
gtggcctttggtctgcccctactggccatgggctactggttcgctccctgcagtcggctg
ggaaatgtcctgcgcagccccttcatgaagtttgtggcccatgccgcctccttcatcatc
ttcctgtgcctgctgttgttcaacgcatcggaccgcttcgagggcatcagcaccatgcca
aacgtgaccgtcactgaccatcccatgcagatctaccgggtcaagaccaccgaattcagc
tggaccgagatactcatcatggtctgggtcacagggatgatgtggtcggagtgtaaggag
ttgtggaccgaggggcccagggagtacatgcagcagctgtggaacgttctggactttggc
atgctctccatcttcattgccgctttcaccgctcggttctttgccttcctccaggccacc
agagcccagcagtacgtcaacgaaaagatccacaccaccgacctctccctagtgacccta
cccccggaggtcaaatactttacctacgcaagggacaaatggctgccgtcggacccccag
ctgatctcagaagggctgtacgccatcgccgtggtgctgagtttcacacgcatcgcttac
atcctgccggctaacgagagcttcggaccgctccagatctccctgggccgcacygtcaaa
gacatcttcaagtttatggtcctgttcatcatggtcttcctggcgttcatgatcggcatg
ttcatcctctattcgtactacttgggtgccaaggtcaacccggccttcaccacgatggag
gagagcttcaagactctgttrtggtctatatttggactgtccgaggtgtcctctgtggtg
ctcaagtacaaccacaagttcatcgagaacatcggctacgttctctatggaatctacaac
gtgaccatggtggtggtgttgctcaacatgctgatcgccatgatcaacagctcctatcaa
gaaatcgaggacgatgcggacgtggagtggaagtttgcacgctccaagctatggctgtcg
tactttgacaacggcaagacactgcctcctcccttcagcatcgttcccactcccaagtcc
ttctaccaccacatcaggtggatagtcggcatgctgcattgccgacaacggagtgtgaag
aaggatctagagnctggggttggcagttcaaagtccaggctcaatctcttcacccagtcc
aacctacgcattgcagagtcccacagcattctgaaccaacccacttgctatcagcaaatc
atgaagcgactcatcaaacgctacgttttgaaagcacaagtggacaaagaaaacgacgag
gtcaatgaaggtgaactgaaagaaatcaagcaggacatctccagtctacgttacgaactc
ctggaagacaagtctcaggctacagaggagctgtccttgcttatccagaaactgagtgac
aaactgaaactaggccctactacacgcttgccctacaagttgacccccccccccccccca
cccacagttcaagagatgcaagagagaagagcatatcaaagcagccaacatcccagcatt
tccccacaccctccacagcaacccactggccaggttgttttgtaa
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