Salvelinus sp. IW2-2015 (Arctic char): 111968532
Help
Entry
111968532 CDS
T05762
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04620
Toll-like receptor signaling pathway
salp04621
NOD-like receptor signaling pathway
salp04622
RIG-I-like receptor signaling pathway
salp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
111968532
04621 NOD-like receptor signaling pathway
111968532
04622 RIG-I-like receptor signaling pathway
111968532
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
111968532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
Sina_ZnF
BLOC1_2
zf-TRAF_2
CALCOCO1
zf-RING_UBOX
DUF1664
Snapin_Pallidin
zf-RING_6
Fez1
DNA_topoisoIV
Spc7
TolA_bind_tri
FapA
Motif
Other DBs
NCBI-GeneID:
111968532
NCBI-ProteinID:
XP_023849942
LinkDB
All DBs
Position
LG9:complement(8976453..8995650)
Genome browser
AA seq
573 aa
AA seq
DB search
MSAGRNADGRELQIPLQQCALSLAALSLAQRPWPSDHVAGFLPQHGGFRDHFVATPEPKY
CCESCKLVLCNPRQTECGHRFCETCISEQLSKPNPVCPEDNLSLFKDKVFRDVCCHREIM
ALRVYCRSEKNGCKEQISLQQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMQKMAMTELQKHKDTVCPSFPVACPNHCTFPSILRSKLTSHQHECPKAHVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKVEDVKGELLERYKVLPGLS
SRLSETLSHYEEMREKNRQLDQKLNTMQELMSSHSEKLLEMELELRSLRSVREEVETLRG
TVESIRSRVATLEGGRGGANPATHTLETQLSRHDDMLSVHEIRLADMDLRFQVLETASFN
GMLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcggaatgcggacgggcgggagctgcagatccccctccagcaatgcgct
ctctccctggccgctctctccctggcccagcgcccctggcccagcgaccacgtggcaggc
ttcctaccccagcacgggggctttagggaccacttcgtagccaccccggaacccaagtac
tgctgtgagtcctgcaagctggtgctctgcaaccccaggcagacagaatgcggacacagg
ttctgtgaaacctgcatctctgagcagctaagcaaaccgaatccagtatgtccagaagat
aatttgtctctgttcaaagacaaggtcttccgtgacgtatgctgccatagagagattatg
gctctgagagtgtactgcaggagtgaaaagaacggctgtaaggagcagataagtttacag
caggtcatggatcatttaaatgtgtgtccgtattttgaggtgccatgcccgttgggaaag
tgcaaagagaagatgatgcgcaaagacattcctgaacatttgagttggaaatgtaaacac
agggagaccacctgtgaattctgcatgcagaagatggccatgactgagttacagaaacac
aaagacaccgtttgtccttcatttccggtggcctgccccaatcattgtactttcccctcc
atcttacggagcaaactgacaagtcatcaacatgagtgtccaaaggctcatgtcacctgc
tcctttatacgctttggatgcaatttcaagggtctcaaccaagacatgagggaccatgaa
tctagctttgcctctgaacacctgcggttgatggcaaccaggaacactacactggaggcc
aaggtggaggatgttaaaggagagcttctggagcggtacaaggttctgccaggcctgagc
agccgtctgtctgaaacattgtctcactacgaggagatgagggagaagaatagacagctg
gaccagaagctcaataccatgcaggagttgatgagttcccactctgagaagcttctggag
atggagctggagctgaggtctctgaggtctgtccgagaggaggtagagaccctccgagga
accgtggagagcatccgctccagagtcgccactctagaaggaggacggggcggggccaac
ccagccacacacacactagagacacagctctcccgtcacgacgacatgctgagcgtccat
gagatccgcctagcagacatggacctgcgcttccaggtcctagagacggcctccttcaat
gggatgctcatctggaagatccgtgactacaagcggcggaaacaagaggctgtggcatca
aagaccctgtctctctacagccagcctttctacactggctactttggctacaagatgtgt
gcccgggtctacctgaacggtgacggcatggggaaaggaacccacctgtctctgttcttc
gtggtgatgcgtggcgagtacgacgccctgctgccctggccctttaagcagaaggtgacc
ttgatgctgatggatcagggcccagccagaaagcacttaggggatgcctttaaaccagac
cccaatagcagcagcttcagacggcccacggcagagatgaacatagcctcgggctgcccg
ctgtttgtggctcagactgtgctggagaacggtacttacatcaaggacgataccatcttc
attaaggtcacagtagatacatctgacctccctgacccctga
DBGET
integrated database retrieval system
