Salvelinus sp. IW2-2015 (Arctic char): 111968620
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Entry
111968620 CDS
T05762
Name
(RefSeq) guanine nucleotide exchange C9orf72-like
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111968620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111968620
Membrane trafficking [BR:
salp04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
111968620
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GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
111968620
NCBI-ProteinID:
XP_023850086
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Position
LG9:14157855..14164285
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AA seq
460 aa
AA seq
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MSSGPPQSPTVAKTEVTVEGECPIFAATFAYWDNILGPRVCHIWAPRCEQPLLLSDGEVT
FLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIISLIFDGELKGDKNTCALSIILPQTE
LAFYLPLHMVCVERLKHIIRKGRIWMQKGYNIISVLSSEIVPIMELLSSMKTHSVPEDID
IKDTILNDDDIGDSCHEDFLHKAVSSHLQTCGCSMVVGSNPDKVNKIVRTLCLFLTPAER
KCSRYCKADSTFKYDTGLFVQGLLKDSMGSFVLPFRQVLYSPYPTTHIDVDINTVKQMPP
CHEHTYIQRRYMRSELSALWKAASEENIAPDTGIHTESFTPDLNVFQDVMHKDTLVKSFI
DEVFMLKPGLNLRSTYLAQFLLILHRKALVLLKYIEDETQKGKKPFRSLRSLKTDLDLMV
EGDLNIIMALAEKQRAGLHSFVFGKQFYTSVQERDVLMSF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaggcccacctcagtcgcccacagtggctaagacagaggtgactgttgaagga
gaatgccctatcttcgctgccacctttgcctactgggacaacatcctgggcccgcgggtg
tgtcacatctgggctcccaggtgtgagcaaccactgttgctgagcgatggcgaagtcacc
ttcctggccaatcacacgctgaacggggagattctgcgcagcgcagagtgcggcgccgta
gacgtcaagttcttcgtcctagccgagaagggtgtcatcatcatctcgctcatcttcgac
ggcgagctgaagggtgacaagaacacctgtgccctgtccatcatcctgccgcagacagag
ctggccttctacctgcccttgcacatggtctgtgtggagaggctcaaacacataatccgc
aagggacgcatctggatgcagaagggctacaacatcatttctgtgctgtcatcagagatt
gtccccatcatggagctgctgtcatccatgaagacacacagtgtcccagaggacatagac
atcaaagacaccatcctaaatgacgatgacatcggagacagctgtcatgaagatttcctg
cacaaggcagtcagttctcatctccaaacttgtggctgctccatggtggtcggaagcaac
ccagacaaagtcaacaagatagtgcgcacactgtgcctcttcctcacccctgctgagagg
aagtgctctcggtactgtaaagctgactctactttcaagtatgacacaggactgtttgta
caaggcctcctcaaggactccatgggcagttttgtcttgcccttccgccaggtgctgtac
tcaccctacccgaccacgcacatcgatgtggacatcaacacggtgaagcagatgccaccc
tgccacgagcacacatacattcagcgacgctacatgcgctcagagctcagcgcgctctgg
aaggcggccagcgaagagaacatcgcccccgacactggcatccacaccgagtccttcacc
cccgacctaaatgtatttcaggacgttatgcataaagacaccctggtaaagtcatttata
gatgaggtgttcatgctgaagccaggtctcaatctgcgaagtacttacttggcgcagttt
ttgctgatccttcacaggaaggcgctcgtactactcaaatacattgaagatgagacgcaa
aagggaaagaagcctttccgctccttgcgcagcttgaagaccgacctcgacctgatggtg
gaaggtgacctgaatatcatcatggcgttggctgaaaagcaaagggctggactgcactcc
tttgtatttgggaagcaattttacaccagtgtacaggagcgagatgtgctcatgagcttt
tga
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